AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aary13g03242 | ATGACAACAAACGGCGTGAAGATGGCATTAACATCCCAAGCATACTTAGACGGATCATCAGTGAAACAAACAAAATCATTAATAACAGAGCTATGTCGTTTGTTTTACAACTTGGGTTGGGTTGGTGGTACCGGTGGAAGTATCACTGCTAGAGTGCACGATGATTCTGTTCCCAAGTCTGATCAGCTTATTATCATGTCTCCTTCTGGTGTGCAGAAGGAAAGAATGGTTGAAGAAGATATGTATGTGTTATCGTCAACTGGAGATATTTTGTTTACGCCATCACCGAAACCGTACCCTCATAAACCTCCAAAGTGTTCAGACTGTGCCTCTCTTTTCATGAAGGCTTATAATATGCGTAATGCTGGTGCAGTCATTCATAGTCATGGAATGGAATCTTGTATCGTGACAATGCTTGATCCTTTGGCAAAAGAGTTTAGGATCACTCATATGGAGATGATTAAAGGGATTCAAGGGCATGGCTATTATGATGAGCTTGTGGTTCCCATAATAGAAAACACTGCTCATGAGAGAGAGTTGACTGAATATCTTGCTGCAGCGATTGAAGCGTACCCAAAAACAACTGCTGTACTGGTCCGAAATCATGGTATCTATGTATGGGGCGATACCTGGATTAGTGCCAAAACTCAGGCTGAATGCTACCACTATCTCTTTGATGCTGCAATCAAACTTCACCAATTGGGCCTTGATTGGTCAACTCCAGGTCATGGTCCCATACAAAGATCCAAACCACTTTTAGGTGATCAAACCACAAGCACATCTCAAAAGCGTTGTATTGTTCTGGATATTGAAGGGACAACTACTCCTATATCATTTGTCACTGATGTTCTTTTCCCCTATGCCCGTAAAAATGTTCAAAGGCATTTAGAAGCAACATACGATACTGATGCTACTCAAGATGATATTAAGTTGTTGCGCTCTCAAGTACAAGATGATTTACAAAACGGAGTTGCGGATGCCGTTCCTATCCCATCTGATGAGGCGGGAAAAGAGAAGGTGATAGCTGCTTTGGTCGCTAATGTTGAAGGAATGATAAAATCTGACAGGAAAATTACTTCCTTAAAACAGTTACAAGGTCACATATGGCAAACTGGATTTGAGAAAAATGAACTGAAAGGTGTGGTTTTTGATGATGTCCCTAGCGCTCTTGAAAAGTGGCATGCTTCTGGTATAAAGGTGTATATATATTCAAGTGGTAGCAGATTAGCACAGAGGCTGTTATTTGGATATACCAATTACGGGGACTTGAGAAACTACTTGTGTGGATTTTTTGACACCACAGTGGGGAACAAGAAAGAGACAAAGAGTTATGTTGAAATATCGGAATCACTTGGAGTTCATAAGCCATCTGAGGTCCTGTTTGTAACCGATATCTATCAAGAAGCTGTAGCTGCAAAGGCAGCAGGCTTGGAGGTGACGATCTCTGTTCGGCCCGGAAATGGACCTCTTCCTGAGAATCACGGCTTCAAGACAATCAAGTCTTTTTCAGAGATATGA | 1518 | 41.57 | MTTNGVKMALTSQAYLDGSSVKQTKSLITELCRLFYNLGWVGGTGGSITARVHDDSVPKSDQLIIMSPSGVQKERMVEEDMYVLSSTGDILFTPSPKPYPHKPPKCSDCASLFMKAYNMRNAGAVIHSHGMESCIVTMLDPLAKEFRITHMEMIKGIQGHGYYDELVVPIIENTAHERELTEYLAAAIEAYPKTTAVLVRNHGIYVWGDTWISAKTQAECYHYLFDAAIKLHQLGLDWSTPGHGPIQRSKPLLGDQTTSTSQKRCIVLDIEGTTTPISFVTDVLFPYARKNVQRHLEATYDTDATQDDIKLLRSQVQDDLQNGVADAVPIPSDEAGKEKVIAALVANVEGMIKSDRKITSLKQLQGHIWQTGFEKNELKGVVFDDVPSALEKWHASGIKVYIYSSGSRLAQRLLFGYTNYGDLRNYLCGFFDTTVGNKKETKSYVEISESLGVHKPSEVLFVTDIYQEAVAAKAAGLEVTISVRPGNGPLPENHGFKTIKSFSEI | 505 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aary13g03242 | 505 | Hamap | Enolase-phosphatase E1 [mtnC]. | 262 | 505 | IPR023943 | GO:0000287(InterPro)|GO:0019509(InterPro)|GO:0043874(InterPro) | |
| Aary13g03242 | 505 | SFLD | C1.5.4: Enolase-phosphatase Like | 264 | 504 | - | - | |
| Aary13g03242 | 505 | Gene3D | - | 277 | 372 | - | - | |
| Aary13g03242 | 505 | NCBIfam | methylthioribulose 1-phosphate dehydratase | 28 | 234 | IPR017714 | GO:0005737(InterPro)|GO:0019509(InterPro)|GO:0046872(InterPro) | |
| Aary13g03242 | 505 | Gene3D | - | 21 | 245 | IPR036409 | - | |
| Aary13g03242 | 505 | NCBIfam | acireductone synthase | 264 | 504 | IPR023943 | GO:0000287(InterPro)|GO:0019509(InterPro)|GO:0043874(InterPro) | |
| Aary13g03242 | 505 | SMART | Aldolase-II-2 | 26 | 229 | IPR001303 | - | |
| Aary13g03242 | 505 | Pfam | Class II Aldolase and Adducin N-terminal domain | 28 | 227 | IPR001303 | - | |
| Aary13g03242 | 505 | SUPERFAMILY | AraD-HMP-PK domain-like | 22 | 241 | IPR036409 | - | |
| Aary13g03242 | 505 | CDD | HAD-EP | 265 | 486 | IPR023943 | GO:0000287(InterPro)|GO:0019509(InterPro)|GO:0043874(InterPro) | |
| Aary13g03242 | 505 | SUPERFAMILY | HAD-like | 260 | 505 | IPR036412 | - | |
| Aary13g03242 | 505 | Hamap | Methylthioribulose-1-phosphate dehydratase [APIP]. | 13 | 237 | IPR027514 | GO:0005737(InterPro)|GO:0019509(InterPro)|GO:0046872(InterPro) | |
| Aary13g03242 | 505 | FunFam | Probable bifunctional methylthioribulose-1-phosphate dehydratase-enolase-phosphatase E1 | 277 | 373 | - | - | |
| Aary13g03242 | 505 | FunFam | Probable bifunctional methylthioribulose-1-phosphate dehydratase-enolase-phosphatase E1 | 21 | 246 | - | - | |
| Aary13g03242 | 505 | Pfam | haloacid dehalogenase-like hydrolase | 264 | 476 | - | - | |
| Aary13g03242 | 505 | SFLD | enolase-phosphatase | 264 | 504 | IPR023943 | GO:0000287(InterPro)|GO:0019509(InterPro)|GO:0043874(InterPro) | |
| Aary13g03242 | 505 | Gene3D | - | 373 | 505 | IPR023214 | - | |
| Aary13g03242 | 505 | PANTHER | ENOLASE-PHOSPHATASE E1 | 258 | 505 | - | GO:0019509(PANTHER)|GO:0043874(PANTHER) | |
| Aary13g03242 | 505 | Hamap | Probable bifunctional methylthioribulose-1-phosphate dehydratase-enolase-phosphatase E1. | 13 | 505 | IPR027505 | - | |
| Aary13g03242 | 505 | Hamap | Enolase-phosphatase E1 [ENOPH1]. | 264 | 505 | IPR027511 | GO:0019509(InterPro) | |
| Aary13g03242 | 505 | FunFam | Probable bifunctional methylthioribulose-1-phosphate dehydratase-enolase-phosphatase E1 | 373 | 505 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aary13g03242 | K16054 | methylthioribulose 1-phosphate dehydratase / enolase-phosphatase E1 [EC:4.2.1.109 3.1.3.77] | ||||
| Aary13g03242 | K09880 | enolase-phosphatase E1 [EC:3.1.3.77] | ||||
| Aary13g03242 | K08964 | methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 6336 | Aary13g03242 | Aary7g02700 | |
| 6337 | Aary13g03242 | Aary7g02828 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Aary | Aary-Chr13:191246006 | Aary7g02828 | Aary-Chr7:226906495 | wgd | |
| Aary | Aary-Chr13:191246006 | Aary7g02700 | Aary-Chr7:221438499 | wgd |