AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aary13g03243 ATGGCTAAACACCTCTGGCTAATTGCCGCTATCTTCGCAATCACCGTTCCTTGTTTGCCAGCATCAATGTCTATGTTATTTCCATCACAAACCCAATGGACCGTGCTAGGTCGCTCACCCGGCATCTCTCGCCAACTCGTGGGCGATACAATTGACATGAGGGAGGAAATGATGATGGAATCCGAAAGTGCACGAAGAGTTCTAGCAGGAAGGGGCTATATAAGTTATGATGCAATGCAAAAGAATAATGTACCGTGCAACCAACGTGGAAAATCGTATTACGATTGTAATAGCAGAGGTCAAGCTAACCCGTATTCACGAGGTTGTAACGTTATCACGAGGTGTGGTGGTAGATAA 357 45.66 MAKHLWLIAAIFAITVPCLPASMSMLFPSQTQWTVLGRSPGISRQLVGDTIDMREEMMMESESARRVLAGRGYISYDAMQKNNVPCNQRGKSYYDCNSRGQANPYSRGCNVITRCGGR 118
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aary13g03243 118 PANTHER RAPID ALKALINIZATION FACTOR-LIKE 7 115 - GO:0009506(PANTHER)|GO:0019722(PANTHER)
Aary13g03243 118 Pfam Rapid ALkalinization Factor (RALF) 55 116 IPR008801 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aary13g03243 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
6338 Aary13g03243 Aary7g02682
6339 Aary13g03243 Aary7g02830
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aary Aary-Chr13:191258041 Aary5g00912 Aary-Chr5:33590912 dispersed
Aary Aary-Chr6:26548071 Aary13g03243 Aary-Chr13:191258041 transposed
Aary Aary-Chr13:191258041 Aary7g02830 Aary-Chr7:226921986 wgd
Aary Aary-Chr13:191258041 Aary7g02698 Aary-Chr7:221376507 wgd