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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aary13g03264 ATGGGTGGTTGTGGGTGGTTTGAGAGGTTTGTCGGATTTAGAAGCAAAAAGGCAAGCAGGCACAAAAAAGTGAAGCCAAAGCAGGATTCCAAGATTGCAAACTGTCGGGATGCTTCTGTGAGGGAATCAAGTTTTCGTGCTGGTAGTACAAGAGTTATTGGCCGAAGCACGGGAACAAGAGAATTTGCTGCAACAAGAATCCAAACTGCATATCGTTCTTACAGGGCAAGAAAACTACTGCGTTGCATGAAAGGGACGTCAAAATTTCAGGTGTTGACCGATGCTGATGCTCTTACTCAACAATCTTCTTCTGCTCTTGACATAATACATTGTTGGAGCAAAATACAAATGGAAATCAGAACCCGCCGCCATTGGATGGTTGCAGAAGGCAGGATAAAACAAAAGAAATGTGAAACTCAAGGGAAAACTGAGTCTAAGCTTCATGAACTTGAGGTCGAATGGACTACTGGACCAGAGACACTGGAAGAGGTCATATCCAGGATACAACACCGTGAAGAAGCCACATATAAGCGTGAGCGAGCAATGGCCTATGCCTTCAATCACTACTGGAGGCCAAGTTCGAATCAATATTTTGGTCAAGCTTACTATGATCTAAGCAAAGATAGTTGGGGATGGAGCTGGAAGGAGCGGTGGATCGCGGTCTGCCCCTGGGAGGCTCGGGTGATCGCCAGGCCTAAGCAGAAGAACAAGACAAGTAAAAAACCGAAGAATGGTGCACCAAAGCAAGTCGTCGCAGTGAAACCTAAGAAGGGTTATGGGAAAGGTACAATCAAAGGGACGTATGGCAATTACTGGCATTGA 822 45.74 MGGCGWFERFVGFRSKKASRHKKVKPKQDSKIANCRDASVRESSFRAGSTRVIGRSTGTREFAATRIQTAYRSYRARKLLRCMKGTSKFQVLTDADALTQQSSSALDIIHCWSKIQMEIRTRRHWMVAEGRIKQKKCETQGKTESKLHELEVEWTTGPETLEEVISRIQHREEATYKRERAMAYAFNHYWRPSSNQYFGQAYYDLSKDSWGWSWKERWIAVCPWEARVIARPKQKNKTSKKPKNGAPKQVVAVKPKKGYGKGTIKGTYGNYWH 273
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aary13g03264 273 ProSiteProfiles IQ motif profile. 60 88 - -
Aary13g03264 273 PANTHER IQ-DOMAIN 5-RELATED 31 237 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aary13g03264 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
169644 Aary5g02756 Aary13g03264
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aary Aary-Chr12:85642205 Aary13g03264 Aary-Chr13:192987306 dispersed
Aary Aary-Chr13:192987306 Aary4g01514 Aary-Chr4:92802811 dispersed
Aary Aary-Chr10:289303307 Aary13g03264 Aary-Chr13:192987306 wgd
Aary Aary-Chr13:192987306 Aary2g01901 Aary-Chr2:134440439 wgd
Aary Aary-Chr13:192987306 Aary5g02756 Aary-Chr5:162357120 wgd
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Aary1g01820 . 1 374 IQD Protein family AT4G14750 49.261 2.59e-90 275.0
Aary1g02228 ACH,AST 1 450 IQD Protein family AT5G03040 54.31 1.13e-146 425.0
Aary1g03522 ACH,AST 108 343 IQD Protein family AT5G07240 43.846 9.23e-45 155.0
Aary2g00368 AST 195 794 IQD Protein family AT1G19870 36.05 9.17e-81 271.0
Aary2g01901 ACH,AST 61 237 IQD Protein family AT3G15050 51.977 5.34e-63 195.0
Aary2g02072 ACH 1 353 IQD Protein family AT3G16490 53.69 5.22e-101 303.0
Aary3g00128 AST 1 414 IQD Protein family AT1G72670 45.287 6.26e-89 273.0
Aary3g00238 AST 1 353 IQD Protein family AT3G16490 51.795 3.06e-87 268.0
Aary3g00582 AST 1 563 IQD Protein family AT1G18840 33.166 9.61e-66 221.0
Aary3g00585 . 1 571 IQD Protein family AT1G18840 35.8 1.86e-77 251.0
Aary3g01588 ACH 1 575 IQD Protein family AT1G74690 39.384 1.32e-81 265.0
Aary4g01043 AST 13 443 IQD Protein family AT5G13460 44.521 4.66e-95 289.0
Aary4g01514 AST 1 237 IQD Protein family AT3G15050 47.431 1.88e-64 201.0
Aary5g01255 AST 1 353 IQD Protein family AT3G16490 48.0 6.79e-68 217.0
Aary5g02522 . 198 262 IQD Protein family AT4G23060 36.923 5.25e-07 44.7
Aary5g02756 ACH,AST 2 240 IQD Protein family AT3G15050 44.269 9.10e-69 212.0
Aary5g02876 AST 1 392 IQD Protein family AT5G35670 42.233 4.78e-77 243.0
Aary6g00125 . 1 517 IQD Protein family AT3G59690 49.47 1.23e-146 429.0
Aary6g00968 ACH,AST 1 450 IQD Protein family AT5G03040 52.318 4.71e-134 390.0
Aary6g01592 AST 1 394 IQD Protein family AT3G49260 50.376 1.52e-93 288.0
Aary6g02244 AST 1 388 IQD Protein family AT3G22190 54.975 4.62e-120 353.0
Aary6g02560 ACH 1 470 IQD Protein family AT4G23060 37.32 1.12e-47 168.0
Aary7g00381 . 201 782 IQD Protein family AT1G19870 32.949 3.05e-57 206.0
Aary7g01433 AST 1 374 IQD Protein family AT4G14750 34.86 6.23e-43 152.0
Aary7g02219 ACH,AST 1 554 IQD Protein family AT1G74690 41.77 5.27e-89 284.0
Aary8g00008 . 295 669 IQD Protein family AT2G43680 46.04 6.33e-85 277.0
Aary8g00901 ACH,AST 1 457 IQD Protein family AT5G03040 45.806 2.89e-112 335.0
Aary8g01337 . 149 481 IQD Protein family AT4G23060 39.566 1.24e-59 200.0
Aary8g01358 ACH,AST 3 331 IQD Protein family AT5G07240 33.85 6.30e-35 132.0
Aary8g01611 AST 1 411 IQD Protein family AT2G26180 57.207 7.83e-141 407.0
Aary8g02407 ACH,AST 1 330 IQD Protein family AT3G16490 36.119 1.10e-31 121.0
Aary9g00495 ACH 1 794 IQD Protein family AT1G19870 36.485 5.58e-110 353.0
Aary9g01688 ACH 7 333 IQD Protein family AT5G07240 41.711 1.92e-41 148.0
Aary9g01698 ACH 18 333 IQD Protein family AT5G07240 42.077 4.12e-40 144.0
Aary9g02003 ACH 1 430 IQD Protein family AT5G03040 39.184 5.93e-81 257.0
Aary9g02023 . 1 430 IQD Protein family AT5G03040 40.0 4.53e-83 263.0
Aary9g03708 AST 11 534 IQD Protein family AT4G00820 42.984 2.41e-117 354.0
Aary10g02139 AST 195 794 IQD Protein family AT1G19870 36.677 2.34e-82 275.0
Aary10g02180 ACH 195 794 IQD Protein family AT1G19870 36.834 1.41e-82 276.0
Aary10g02337 . 11 534 IQD Protein family AT4G00820 34.515 3.13e-60 204.0
Aary10g02462 ACH,AST 108 343 IQD Protein family AT5G07240 43.462 1.70e-44 155.0
Aary10g02487 ACH 108 343 IQD Protein family AT5G07240 43.846 9.23e-45 155.0
Aary10g02895 ACH 1 450 IQD Protein family AT5G03040 46.947 6.00e-117 348.0
Aary10g04028 ACH,AST 1 450 IQD Protein family AT5G03040 54.095 8.32e-147 425.0
Aary10g04446 ACH 102 575 IQD Protein family AT1G74690 41.513 4.18e-81 263.0
Aary10g05272 AST 61 237 IQD Protein family AT3G15050 52.542 1.64e-63 196.0
Aary10g05387 . 1 353 IQD Protein family AT3G16490 53.69 4.09e-100 301.0
Aary11g00124 AST 1 414 IQD Protein family AT1G72670 45.035 4.15e-89 274.0
Aary11g00238 ACH,AST 1 353 IQD Protein family AT3G16490 51.795 5.42e-87 267.0
Aary11g00790 AST 1 571 IQD Protein family AT1G18840 35.64 2.25e-76 248.0
Aary12g00931 AST 1 443 IQD Protein family AT5G13460 43.207 9.67e-94 286.0
Aary12g00933 . 1 443 IQD Protein family AT5G13460 44.543 2.15e-100 303.0
Aary12g01408 AST 1 237 IQD Protein family AT3G15050 46.429 5.03e-65 203.0
Aary13g00909 . 11 534 IQD Protein family AT4G00820 53.108 2.46e-152 445.0
Aary13g01171 . 11 534 IQD Protein family AT4G00820 53.014 1.28e-152 446.0
Aary13g01745 AST 1 353 IQD Protein family AT3G16490 47.967 3.49e-67 215.0
Aary13g02473 . 1 374 IQD Protein family AT4G14750 49.015 2.62e-90 275.0
Aary13g03264 AST 2 240 IQD Protein family AT3G15050 43.874 1.42e-68 211.0
Aary13g03411 AST 1 392 IQD Protein family AT5G35670 42.476 7.73e-77 242.0
Aary13g03423 . 1 404 IQD Protein family AT5G35670 41.745 2.67e-77 244.0
Aary14g00112 . 1 517 IQD Protein family AT3G59690 49.123 1.38e-147 432.0
Aary14g01099 ACH,AST 1 450 IQD Protein family AT5G03040 51.876 3.30e-132 386.0
Aary14g01777 AST 1 394 IQD Protein family AT3G49260 51.621 8.79e-95 291.0
Aary14g01804 . 1 394 IQD Protein family AT3G49260 51.87 1.37e-95 294.0
Aary14g02435 AST 1 388 IQD Protein family AT3G22190 54.975 4.62e-120 353.0
Aary15g01377 AST 1 374 IQD Protein family AT4G14750 34.19 1.94e-43 153.0
Aary15g02066 ACH,AST 2 554 IQD Protein family AT1G74690 41.489 1.47e-86 278.0
Aary15g02078 . 1 554 IQD Protein family AT1G74690 41.343 4.46e-86 276.0
Aary16g00008 . 295 669 IQD Protein family AT2G43680 45.906 1.10e-85 279.0
Aary16g00922 ACH,AST 1 457 IQD Protein family AT5G03040 45.591 4.58e-111 332.0
Aary16g01349 ACH,AST 3 331 IQD Protein family AT5G07240 32.468 3.51e-32 124.0
Aary16g01611 AST 1 413 IQD Protein family AT2G26180 57.399 2.63e-142 412.0
Aary16g02449 AST 1 330 IQD Protein family AT3G16490 36.176 3.69e-33 125.0
Aary17g00512 . 1 794 IQD Protein family AT1G19870 35.509 4.80e-107 345.0
Aary17g03574 AST 48 534 IQD Protein family AT4G00820 43.786 1.75e-113 343.0