Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aary13g03289	ATGTCTTTTACACTAGTCCCTTTAACGTCCACATTCACTTCATTTCCATCTAAACAATTAGCCACATCCACCAACTCACAATTCATCTCCAAGGCTCGAACCAACCAAACCCATGGTTTCAAAGTCTCATGCAACGCTTCACCCGAAGACAATGAGAACCATCTCATACTACCCGAAACACAAAAGCTTATACTACCCAATAATGTAGACCGAAGGAACCTCCTCGTGGGGCTTGGCGGTCTGTATACGGCAGCAAGCCTTACTTCACTCCCGTCAGCCTTTGCTAGTCCCATTACGGCTCCTGATATCTCGTCCGTATGCCAGGACGCAAAAACAGGTTTTGAGGCGTCGAAGGACGATAAGGAGGCTGTACGGACGGGGAAATGCTGCCCTCCGAGCCTCGGCAAGCCGATTCAACCGTTTGTGTTTCCAAGTAAAGAAAAGACCAGGGTGCGATGGCCGGCTCATAAAGGGACGGATAAGCAAGTGAAGAGCTACAAGAAAGCCATTAAAGCCATTCTGGATCTCCCAGATGACCACCCGCACAGCTTCGCAAGCCAAGCTAAGATTCATTGTGCTTATTGTAACGGTGGTTATACTCAAGTCGATAGCGGTTTCCCAGATATCGAAATTCAGATTCATAACTCGTGGCTATTCTTTCCATTCCATCGTTGGTACCTTTATTTCTATGAAAGAATTCTCAGAAAGTACAGTGGGGATGACGATTTCGCGTTACCTTACTGGAACTGGGACAATCCAGATGGAATGACAATTCCTCAAATGTTTGTAGAAGCAAAAGATGATGGCGGAAACGAAAATCCTCTCTATGACATAAACCGGGACGTGCGTCATCTCCCACCAAAAGTAGTAGATCTGTTCTTTAGTGGAGCCAAGATAGCAAATAATTTTGCGAATGAACTAGACAGTGAAACACAGAAAGCCTGCAATCTTAGTATGGTGTACAAAGATTTGATCAGAAACGCAACTGATTGGAAAAGCTTCTTCGGAGGAGAATACACGGCTGGGCCGCAGACTGATACGGCGTCAGTCGGGTCTGTGGAAAGCAACACTCACACTGCTGTACACGTATGGGTTGGTAACCCAGATAACCTTAATAGAGAGGACATGGGCAACTTCTACTCTGCGGGATATGATCCTTTGTTTTACGTTCACCATGCAAACGTCGACCGTATGTGGAAACTGTGGAAGGATTTGGGAATTCCTGGACATTCAGAACCAACCGCGGATGACTGGCTAAATGCATCATATGTGTTCTATGACGAGAATGAGAATCTTGTACGTGTAAACAACAAAGACTCTGTCAACATAGATAAGCTCAAATATGATTTTGAAGAGTCAAGGACACCTTGGAAGGGCAGTCGACCTCCCCAACGTAAGGAGAAGTCCAAAGAATTATCGAAGGCACTTATTGGAGAGACGAAAACGGTGGAGGAAGCCTTTAAGAAACCAGCGCGTCTGGACCCACTTCTCAAGGTTCGTGTGAAGAGGCCAACTAAGAACAGAAGTCCCGAGGATAAGGCCAAGGCGAATGAGATTTTGTGTATAAACGGGATACAATTTAACAGCAACAAGTTTGTGAAATTCGACGTGTTTGTGAATGATAAAGTGGACACAAACGGGACGCTGCCAACAGCTTGTGATCCTGAGTTTGCTGGTTCTTTTGCACAGGTTCCACACAGTGGCAACGAACAAGGTGGAATGTTGATGTCAAGTGCAGCGAGGTTCGGTTTGAATGATCTTTTGGACGACACAAAAACTGAAGACGAAGAGTATGCGTTGGTGGCTTTGGTGGCAAGGGCAGGTTGCGAAGATCTCACTGTCTCAGGGATCGAGATCAAGTTGGTTCCTATTGGTTCCACTTAG	1884	45.91	MSFTLVPLTSTFTSFPSKQLATSTNSQFISKARTNQTHGFKVSCNASPEDNENHLILPETQKLILPNNVDRRNLLVGLGGLYTAASLTSLPSAFASPITAPDISSVCQDAKTGFEASKDDKEAVRTGKCCPPSLGKPIQPFVFPSKEKTRVRWPAHKGTDKQVKSYKKAIKAILDLPDDHPHSFASQAKIHCAYCNGGYTQVDSGFPDIEIQIHNSWLFFPFHRWYLYFYERILRKYSGDDDFALPYWNWDNPDGMTIPQMFVEAKDDGGNENPLYDINRDVRHLPPKVVDLFFSGAKIANNFANELDSETQKACNLSMVYKDLIRNATDWKSFFGGEYTAGPQTDTASVGSVESNTHTAVHVWVGNPDNLNREDMGNFYSAGYDPLFYVHHANVDRMWKLWKDLGIPGHSEPTADDWLNASYVFYDENENLVRVNNKDSVNIDKLKYDFEESRTPWKGSRPPQRKEKSKELSKALIGETKTVEEAFKKPARLDPLLKVRVKRPTKNRSPEDKAKANEILCINGIQFNSNKFVKFDVFVNDKVDTNGTLPTACDPEFAGSFAQVPHSGNEQGGMLMSSAARFGLNDLLDDTKTEDEEYALVALVARAGCEDLTVSGIEIKLVPIGST	627

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aary13g03289	627	SUPERFAMILY	Di-copper centre-containing domain	128	457	IPR008922	-
	Aary13g03289	627	ProSitePatterns	Tyrosinase CuA-binding region signature.	214	231	IPR002227	GO:0016491(InterPro)
	Aary13g03289	627	Pfam	Common central domain of tyrosinase	182	404	IPR002227	GO:0016491(InterPro)
	Aary13g03289	627	PIRSF	PPO-plant	1	623	IPR016213	GO:0004097(InterPro)\|GO:0046148(InterPro)
	Aary13g03289	627	Pfam	Protein of unknown function (DUF-B2219)	490	621	IPR022740	GO:0004097(InterPro)
	Aary13g03289	627	Pfam	Polyphenol oxidase middle domain	414	462	IPR022739	GO:0004097(InterPro)
	Aary13g03289	627	ProSitePatterns	Tyrosinase and hemocyanins CuB-binding region signature.	385	396	IPR002227	GO:0016491(InterPro)
	Aary13g03289	627	PRINTS	Tyrosinase copper-binding domain signature	245	250	IPR002227	GO:0016491(InterPro)
	Aary13g03289	627	PRINTS	Tyrosinase copper-binding domain signature	214	231	IPR002227	GO:0016491(InterPro)
	Aary13g03289	627	PRINTS	Tyrosinase copper-binding domain signature	357	368	IPR002227	GO:0016491(InterPro)
	Aary13g03289	627	PRINTS	Tyrosinase copper-binding domain signature	384	402	IPR002227	GO:0016491(InterPro)
	Aary13g03289	627	PANTHER	TYROSINASE FAMILY MEMBER	69	585	IPR050316	-
	Aary13g03289	627	Gene3D	-	96	455	IPR008922	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aary13g03289	K00422	polyphenol oxidase [EC:1.10.3.1]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	4532	Aary10g05208	Aary13g03289
	6349	Aary13g03289	Aary15g02576
	6350	Aary13g03289	Aary2g01723
	6351	Aary13g03289	Aary7g02552
	168162	Aary5g02814	Aary13g03289

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Aary	Aary-Chr13:195525849	Aary5g02815	Aary-Chr5:168414233	dispersed
	Aary	Aary-Chr9:89883972	Aary13g03289	Aary-Chr13:195525849	transposed
	Aary	Aary-Chr13:195525849	Aary15g02576	Aary-Chr15:198545727	wgd
	Aary	Aary-Chr13:195525849	Aary5g02813	Aary-Chr5:168151198	wgd
	Aary	Aary-Chr13:195525849	Aary7g02547	Aary-Chr7:215492779	wgd