Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aary13g03290 | ATGGGGAATAGATTGGGTAGAAGGAGACAAATAGTTGATGAAAAGTATACAAAGCCACAAGGGTTGTATCAACATAAAGATGTTGATCATAAGAAGCTTAGGAAGCTTATACTTGATGCGAAACTAGCTCCGTGTTATCCGGGTGATGATGATTGTAGTTGTGACCTTGAAGAATGTCCAATTTGTTTCTTGTATTATCCAAGTTTGAATAGATCAAGATGTTGCACGAAAGGCATTTGCACCGAGTGCTTTCTCCAAATGAAGACACCGAATTCTACACGTCCTACGCAATGTCCGTTTTGTAAAACGTTGAATTACGCTGTGGAGTATAGAGGCGTGAAGAGTAAAGAGGAAAAGGGGCAGGAGCAAATTGAAGAACAAAGGGTGATAGAAGCAAAAATAAGAATGAGACAACAAGAAATTCTAGATGAAGAGGAAAGAATGATAAAAAGGCAAGAGATGAGCTCTTCAAGCGGCATAATTGAACCAAACGTGACTGAATATTTCTCCAGAGCAGCAACATCTTCTTCTGAAAGTGAGGAAATTGTCTCTGCTCCACAGCAGAGTGGCACTGAAATTCGACATCCTCTGCGCTCTAGGGAGAGCAGAGATGATGAATTTGACCTTGATCCTGAGAACATAATGCTTATGGAAGCCATCTGGTTGTCCTATCAGGAGGATAACAAGCACCAACACCATAACCCAAACTATGGCGACGCTGCACAACTAGCAAAATATGCAACAGAAGTTCGTGTATTAGCATCCATGGCTCCGCAATCCGAAATGGCATCAGCATCTTCATCATCATCACCTTCTGGAGGTCTGGCATGTGCTATAGCTGCACTAGCCGAACGCCAACAAACGGGAGCAGAATCATCAACTAATTACCACAACTACGGCGTTAATACCTCAACATACAACATACATCCCGACCATAGCTCAACAGGGTTGTCACTTAATAACCATCTACAAATAAGCAGACAAGAACATGAATCATGGGGTGAAAATGTAGTTGAACCTGAAACTGGTTATGGGTATGATCATTATGATAATGTCCACAGAGGAGGACAGTGTGTGCAACAAGATGAGAATATAGTTCCTGAAAGCTTTGAAGAGCAGATGATGTTAGCTATGGCGGTTTCACTGGCAGAGGCTCGAGCTAGGACTAGTAGTAGTACACCAGAAGTTGCTTGGATTTAG | 1200 | 42.17 | MGNRLGRRRQIVDEKYTKPQGLYQHKDVDHKKLRKLILDAKLAPCYPGDDDCSCDLEECPICFLYYPSLNRSRCCTKGICTECFLQMKTPNSTRPTQCPFCKTLNYAVEYRGVKSKEEKGQEQIEEQRVIEAKIRMRQQEILDEEERMIKRQEMSSSSGIIEPNVTEYFSRAATSSSESEEIVSAPQQSGTEIRHPLRSRESRDDEFDLDPENIMLMEAIWLSYQEDNKHQHHNPNYGDAAQLAKYATEVRVLASMAPQSEMASASSSSSPSGGLACAIAALAERQQTGAESSTNYHNYGVNTSTYNIHPDHSSTGLSLNNHLQISRQEHESWGENVVEPETGYGYDHYDNVHRGGQCVQQDENIVPESFEEQMMLAMAVSLAEARARTSSSTPEVAWI | 399 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aary13g03290 | 399 | ProSiteProfiles | Zinc finger RING-type profile. | 59 | 102 | IPR001841 | - | |
| Aary13g03290 | 399 | PANTHER | PROTEIN SIP5 | 1 | 308 | IPR039301 | GO:0005737(PANTHER) | |
| Aary13g03290 | 399 | MobiDBLite | consensus disorder prediction | 176 | 193 | - | - | |
| Aary13g03290 | 399 | MobiDBLite | consensus disorder prediction | 176 | 206 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aary13g03290 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 4536 | Aary10g05210 | Aary13g03290 | |
| 6352 | Aary13g03290 | Aary2g01724 | |
| 168163 | Aary5g02817 | Aary13g03290 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Aary | Aary-Chr10:286462610 | Aary13g03290 | Aary-Chr13:195818483 | dispersed | |
| Aary | Aary-Chr13:195818483 | Aary2g01724 | Aary-Chr2:126250569 | dispersed | |
| Aary | Aary-Chr13:195818483 | Aary5g02817 | Aary-Chr5:169003677 | wgd |