Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aary13g03293	ATGGCAACTTCTTCAAACTACACTCATGCTTTTACAAACAATAACCCAAGAACCAAATTCTTAACATCTTCTAAAGATGTATTTGGTTCATCTCCAGTTTCAATAACAGTTAAAAAACAGAGCAACCAAACTCGTCAAAATTCGATACGTTCGGCTCTTCAAACTCCCTCAATTCTTCAAGTACCGAAACAAACACCGCGAAAAAGCTCGGAAAGTATCGAATTACCATCTTTAAGTCCATCTCCAAAGGTCCCACAAAATTGGAACCTTTTGCAAAAGCTTGCTTCGATCGCATTGGACGCTATCGAAGACCGAATAAAAGATAATGAAAAATTACACCCTTTACCGAAAACAGTCGACCCAGATGTTCAGATCGCCGGAAACTTCTCTCCGGTACCCGAGCAGCCAGTGAGGCATTCTTTACCGGTGGCCGGAAAAATACCGAAGCATTTTAACGGTGTTTATTTACGTAACGGAGCAAACCCATTATTCGAACCAACTTCCGGGCATCATTTGTTTGACGGAGATGGCATGATTTATGCTGTAAAATTCGATAACGGGTCGGCGAGTTACGCGTGTAGACACACGGAAACTCACCGACTCGTACAGGAACGCGCTATTGGAAAGCCGGTTTTCCCCAAAGCTATTGGGGAACTACACGGGCATTCTGGTATCGCGAAATTGTTGTTGTTTTACGCACGTGGATTGTGCGGGTTAGTTGATCACAACAATGGTATTGGCGTAGCTAACGCTGGTTTGGTTTATTTTAATAACCGGCTGTTAGCTATGTCGGAAGATGATTTACCTTATCATGTTAGAGTTACACCTTCTGGCGATTTGAAAACCGCTGGAAGGTATAACTTTAATGGACAGCTAGAGTCCACTATGATAGCTCACCCGAAACTGGACCCAGTTTCGGGTGAACTGTTTGCATTAAGTTATGACGTTATTAAAAAACCATATTTGAAATATTTTCGGTTTTCGCCCGATGGGAAGAAGTCAGATGATGTGGAAATTGATTTGGAGAAACCGACAATGGTTCATGATTTCGCGATAACTGAAAACTACGTAGTGGTCCCTGACCATCAAGTAGTTTTCAAGATGTCGGAAATGGTGACGGGTGGGTCACCCGTTGTATACGACAAAGAAAAAGTTTCGCGGTTTGGTGTTTTGGACAAATATGCTGAAAATGGGTCGGGGATCAAATGGGTCGAGGTTCCGGATTGTTTCTGTTTTCATTTGTGGAATGCGTGGGAGGAGCCTGAGTCGGATGAAGTTGTGGTAATCGGGTCGTGTATGACTCCAGCTGACTCGATTTTTAACGAATGTAACGAAGAGTTAAAAAGTGTTTTATCTGAGATTCGACTTAACTTAAAAACCGGAAAATCAACACGCCGAGCAATCATTTCACCCGAAAACGATGTTAACTTAGAAGCTGGAATGGTGAACAAAAATCTTTTAGGCCGAAAAAGTAAATACGCTTATCTAGCGATTGCTGAACCATGGCCTAAAGTGTCGGGTTTTGCCAAAGTTGATCTTTCAACAGGGGAGACTAAGAAGTTTATTTATGGAGATGAAAAGTATGGTGGCGAGCCGTTGTATCTACCTAGAGACAATGCTACTGACGAAGACGATGGTCATATTCTGGCCTTTGTGCACGACGAAAAAGCATGGAAGTCCGAACTCCAGATTGTGAATGCAAAGACAATGGAATTAGAGGCGACAGTTATGTTACCATCGAGGGTTCCTTATGGCTTTCATGGAACATTTATTCCAGCCCGTGATTTAGCAACGCAGGCGTGA	1803	42.71	MATSSNYTHAFTNNNPRTKFLTSSKDVFGSSPVSITVKKQSNQTRQNSIRSALQTPSILQVPKQTPRKSSESIELPSLSPSPKVPQNWNLLQKLASIALDAIEDRIKDNEKLHPLPKTVDPDVQIAGNFSPVPEQPVRHSLPVAGKIPKHFNGVYLRNGANPLFEPTSGHHLFDGDGMIYAVKFDNGSASYACRHTETHRLVQERAIGKPVFPKAIGELHGHSGIAKLLLFYARGLCGLVDHNNGIGVANAGLVYFNNRLLAMSEDDLPYHVRVTPSGDLKTAGRYNFNGQLESTMIAHPKLDPVSGELFALSYDVIKKPYLKYFRFSPDGKKSDDVEIDLEKPTMVHDFAITENYVVVPDHQVVFKMSEMVTGGSPVVYDKEKVSRFGVLDKYAENGSGIKWVEVPDCFCFHLWNAWEEPESDEVVVIGSCMTPADSIFNECNEELKSVLSEIRLNLKTGKSTRRAIISPENDVNLEAGMVNKNLLGRKSKYAYLAIAEPWPKVSGFAKVDLSTGETKKFIYGDEKYGGEPLYLPRDNATDEDDGHILAFVHDEKAWKSELQIVNAKTMELEATVMLPSRVPYGFHGTFIPARDLATQA	600

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aary13g03293	600	PANTHER	BETA-CAROTENE DIOXYGENASE	111	592	IPR004294	GO:0009570(PANTHER)\|GO:0010436(PANTHER)\|GO:0016121(PANTHER)\|GO:0016702(InterPro)
	Aary13g03293	600	MobiDBLite	consensus disorder prediction	1	25	-	-
	Aary13g03293	600	Pfam	Retinal pigment epithelial membrane protein	134	592	IPR004294	GO:0016702(InterPro)
	Aary13g03293	600	MobiDBLite	consensus disorder prediction	38	82	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aary13g03293	K09840	9-cis-epoxycarotenoid dioxygenase [EC:1.13.11.51]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	4541	Aary10g05212	Aary13g03293
	6355	Aary13g03293	Aary15g02572
	6356	Aary13g03293	Aary7g02544
	168165	Aary5g02820	Aary13g03293

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Aary	Aary-Chr10:286639591	Aary13g03293	Aary-Chr13:196576327	dispersed
	Aary	Aary-Chr13:48937054	Aary13g03293	Aary-Chr13:196576327	dispersed
	Aary	Aary-Chr13:196576327	Aary4g02785	Aary-Chr4:190230581	dispersed
	Aary	Aary-Chr13:196576327	Aary15g02572	Aary-Chr15:198231138	wgd
	Aary	Aary-Chr13:196576327	Aary5g02820	Aary-Chr5:169949756	wgd
	Aary	Aary-Chr13:196576327	Aary7g02544	Aary-Chr7:215345975	wgd