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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aary13g03312 ATGGCAAAGCAAAAGATTGTTGTTAGAGTTACAATGAACACCGACAAGAAATCTCGTAAGGCTTTGGGGATCGCTGTTAGTCTTAATGGAATTGAATCAGCATCTTTCGTCGGATCAGACCAGATAGCAGTGACAGGGGAAGGTATCGACTCGGTCAAACTAGCAACTTTACTAAGGAAAGGTGTAGGATACACGGAGCTAGTGACTGTTGGTAACGTGGAGGAGAAGAAACCCGAGGCGAAGGAATCGAAGCCAGCCGAGGTGACATGGCAAATTAATCCTTACGAATACTACTATAATAACTACGGCATGCCATATTATTATGTTTATTAG 333 42.94 MAKQKIVVRVTMNTDKKSRKALGIAVSLNGIESASFVGSDQIAVTGEGIDSVKLATLLRKGVGYTELVTVGNVEEKKPEAKESKPAEVTWQINPYEYYYNNYGMPYYYVY 110
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aary13g03312 110 Gene3D - 1 76 - -
Aary13g03312 110 PANTHER OS04G0464100 PROTEIN 4 88 IPR044296 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aary13g03312 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aary Aary-Chr13:198565508 Aary13g03312 Aary-Chr13:198960265 dispersed
Aary Aary-Chr13:198960265 Aary5g02856 Aary-Chr5:173659551 dispersed
Aary Aary-Chr13:198960265 Aary13g03313 Aary-Chr13:198982437 tandem