AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aary13g03313 ATGGCAAAGCAAAAGATTGTTGTTAGAGTGACGATGGAGAACGACAAGAAATCTCGTAAGGCTTTGAAGATCGCCGTTAGTCTCGATGGAGTTGAATCAGCGTCTTTCGTTGGATCAGACCAGATAGCCGTGACAGGGGAAGGTGTTGACTCGGTTAAACTAGCAACTTTACTAAGGAAAGGTGTAGGATTCACGGAGCTAGTGACTGTTGGTAACGTGGAGGAGAAGAAACCCGATGCTGCGAAGGAACCGAAGCCAGCAGACGACGTGATTTGGCAAATTGATCCTTACGAGTACAATTACTACAATGGCTATGGCATCCCATACTATTACGTATATGATTTGTGA 348 45.11 MAKQKIVVRVTMENDKKSRKALKIAVSLDGVESASFVGSDQIAVTGEGVDSVKLATLLRKGVGFTELVTVGNVEEKKPDAAKEPKPADDVIWQIDPYEYNYYNGYGIPYYYVYDL 115
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aary13g03313 115 Gene3D - 1 76 - -
Aary13g03313 115 PANTHER OS04G0464100 PROTEIN 4 87 IPR044296 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aary13g03313 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aary Aary-Chr13:198982437 Aary13g03315 Aary-Chr13:199099413 dispersed
Aary Aary-Chr13:198960265 Aary13g03313 Aary-Chr13:198982437 tandem
Aary Aary-Chr13:198982437 Aary13g03314 Aary-Chr13:199036389 tandem