AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aary13g03321 ATGCACAAAACAGCACAATCATGGTTCACAGGAGGCCCAAGCCAATCAAGCAGCGATCTGAATAAAAAACCACCTTCACTTCTTGCTGATTGGAACGCATACGCTGCATCATCTTCACAAGCTGATAGTCAAGATCTGGATTTAGGGTTTGATATTGAATCTGCTGTTAGGACTAAGGTTTCCGGTACTTATAATGTAGTTTCAAAGGGAGTGAGGGACATACCTGGTAGTTTGCAGTCGGCAACAAGCAATGTCTCAACTGGAAAGTCTTTCATGACGTTTGGTATACTTCTTGCTGTTGGGGTGTTCCTAGTCTTTATTGCGGTCACTGTATTTCTACCAGTCATGGTGTTTGCGCCTCAGAAGTTTGCTATATGTTTCACAGTTGGTTGTGCCCTCATAATTGCTTCATTTTTTGCTCTAAAAGGTTATAGAACTCAGTTTGCACACATGACATCTAAAGAGAGACTTCCTATTACATTGGGCTTTATTGGCAGCATGCTCGGTACCATTTATGTTTCAATGGTCCTTCACAGTTATGTTCTTTCCGTGTTCTTCTCAATTTTACAGGTTGTTTCATTGTCATACTACGCAATCTCATACTTTCCTGGAGGATCGGCTGGCGTGAAGTTCTTCACTTCTGCTCTTACTTCTTCGATTATGGGTTGCTTTGGGAGGTGA 681 42.0 MHKTAQSWFTGGPSQSSSDLNKKPPSLLADWNAYAASSSQADSQDLDLGFDIESAVRTKVSGTYNVVSKGVRDIPGSLQSATSNVSTGKSFMTFGILLAVGVFLVFIAVTVFLPVMVFAPQKFAICFTVGCALIIASFFALKGYRTQFAHMTSKERLPITLGFIGSMLGTIYVSMVLHSYVLSVFFSILQVVSLSYYAISYFPGGSAGVKFFTSALTSSIMGCFGR 226
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aary13g03321 226 Pfam Got1-Sft2-like family 92 203 IPR007305 GO:0016192(InterPro)
Aary13g03321 226 MobiDBLite consensus disorder prediction 1 23 - -
Aary13g03321 226 PANTHER UNCHARACTERIZED 1 218 IPR011691 GO:0016020(InterPro)|GO:0016192(InterPro)
Aary13g03321 226 MobiDBLite consensus disorder prediction 1 24 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aary13g03321 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aary Aary-Chr2:154408220 Aary13g03321 Aary-Chr13:199670593 transposed
Aary Aary-Chr13:199670593 Aary5g02853 Aary-Chr5:173324370 wgd