AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aary13g03349 ATGGCGGCAATATTGGCTTCCAACAGCTGCTATTGCCGTGATGTGCAACTCGTGAACCAAGGAAGAACAACAGACAGTCTCAGCTTCTCGAGATCTGTTTCTAACCAAAAACTAGACCAACATGAATGTACTTTACCCAAAAGTCAAAGGTTCCCTAAGTTTCATGTCAAGATGCAGCAGACGGAATCACCCATGAAATATGGCAGCAACGGTCGACCTACAAATGGCCAACCTGTAAAATTGGGTGCTAATGGTAAACCAGTGAATTTGGGTGCTAATGGGCAACCCGTGAAATTAGGTAACAAAGGTCAACCGATCACAATGGTTTCCACCAGTGACGTGGTAAATAACAAACAAACAGCAGGAATAGTGAATGGGTCAACAAAAGTTGTTAATGGAACAAGTCTTGTTAGGAGAGCGACCACACCGCCGCTAGTTAAGTCTGTAAAAGTTAGAGAATCCACAGGCTTTCCGCCTTCTGAGGAATTGAGGGTCTTGCCGTCTGATGAAAGTTTCAGTTGGGCGAATGAGAATTATAATTCGGTACAAAGATCAATAGATGTGTGGTCTTTTGTTCTTTCTTTACGTGTTCGTGTTTTATTTGACAATGCTAAGTGGGCGTATCCTGGAGGCTTCACAGAAGACAAACAGAAAGGCAGAAGAAGAAAAACGGCTGCATGGTTAAGAGAGCGTGTCCTTCAACTTGGTCCAACTTTTATTAAACTTGGGCAGTTATCTTCAACAAGATCAGATCTATTTCCACGTGAATTTGTCGACGAGCTCGCCAAATTACAGGATAGAGTACCGGCATTCTCACCAGAAAAAGCGAAGGGTTTCATTGAAAAAGAATTGGGTGCTCCGGTTAATATAATCTTTAAGGAGTTTGAAGAACGACCAATTGCAGCTGCTAGTCTTGGTCAGGTACATCGTGCAATCTTACATAATGGAGAGAAAGTAGTTGTTAAAGTTCAAAGACCTGGTTTGAAGAAACTTTTTGATATCGATTTACGGAATCTAAAGCTAGTCGCAGAGTATTTTCAAAGAAGTGAAACTCTTGGTGGCCCAACAAGGGACTGGATGGGGATCTATGATGAATGTGCAAAGATCTTGTACCAGGAGATTGATTATATAAATGAAGGGAAAAATGCTGATAGATTTCGTCGGGACTTCCGTAATATAAAGTGGGTCCGAGTGCCTCAAGTATTCTGGGATTATACTGCAACAAAGGTGCTGACTTTGGAGTATGTTCCAGGCATTAAGATCAACAATATAGATGCTATAAAAGCTAGGAGTTACAGTCGATCCCGGATCTCTTCACGCGCCATTGAATCATACTTGATTCAGATCCTGAAAACAGGTTTCTTTCATGCTGATCCTCATCCCGGAAATCTTGCTATTGACGTGGATGAATCACTAATCTACTATGATTTTGGCATGATGGGGGAGATTAAGTCCTTCACCAGAGAAAGATTGATGGATCTTTTTTATGCAGTTTATGAAAAAGATGCAAAAAAGGTTATGAACAGTTTGATAAGTCTTGAAGCCCTTCAACCTACTGGAGACATGTCACCGGTTAGGCGATCGGTTCAGTTCTTTTTGGACAATTTGCTGAGTCAATCACCAGATCAGCAGACAACTTTGGCTGCCATAGGCGAGGATTTATTTTCTATAGCAACGGATCAGCCTTTTCGGTTCCCATCCACCTTCACGTTTGTAATTAGGGCATTTTCCACTCTTGAAGGAATTGGCTACTCACTTGACCCAGATTTTTCATTTGTTAAGATTGCTGCACCTTACGCACAGGAACTGTTAGATCTCAAAGAACAGCGGCCAAGTGGAACACAACTTGTTGCCGAAATGCGTAAACAAGCTGATGATGCAAGATCAAATACCATGTCGATGCCTTACAGAGTTCAGCGAATTGAAGAGTTTGTGAAACAACTAGAAATAGGAGACGTTAAACTTCGTGTCAGAGTTCTTGAGTCTGAACGAGCAGCCAAGAAGGCAACAATATTGCAAATGGCAACAATGTATACAATAATCGGGGGTACCCTTGTAAACATTGGTGTCACATTTAGCACACAAGCTGGCAACCAACTTATAGCAAACGGGTCCTTTGTTGGCGCAGGTGTTTTCATAGCTTTGCTTATTAGGTCCATGCAAAGGGTGAAGAAGCTTGATAAATTCGAAAAGATGATATAA 2202 41.69 MAAILASNSCYCRDVQLVNQGRTTDSLSFSRSVSNQKLDQHECTLPKSQRFPKFHVKMQQTESPMKYGSNGRPTNGQPVKLGANGKPVNLGANGQPVKLGNKGQPITMVSTSDVVNNKQTAGIVNGSTKVVNGTSLVRRATTPPLVKSVKVRESTGFPPSEELRVLPSDESFSWANENYNSVQRSIDVWSFVLSLRVRVLFDNAKWAYPGGFTEDKQKGRRRKTAAWLRERVLQLGPTFIKLGQLSSTRSDLFPREFVDELAKLQDRVPAFSPEKAKGFIEKELGAPVNIIFKEFEERPIAAASLGQVHRAILHNGEKVVVKVQRPGLKKLFDIDLRNLKLVAEYFQRSETLGGPTRDWMGIYDECAKILYQEIDYINEGKNADRFRRDFRNIKWVRVPQVFWDYTATKVLTLEYVPGIKINNIDAIKARSYSRSRISSRAIESYLIQILKTGFFHADPHPGNLAIDVDESLIYYDFGMMGEIKSFTRERLMDLFYAVYEKDAKKVMNSLISLEALQPTGDMSPVRRSVQFFLDNLLSQSPDQQTTLAAIGEDLFSIATDQPFRFPSTFTFVIRAFSTLEGIGYSLDPDFSFVKIAAPYAQELLDLKEQRPSGTQLVAEMRKQADDARSNTMSMPYRVQRIEEFVKQLEIGDVKLRVRVLESERAAKKATILQMATMYTIIGGTLVNIGVTFSTQAGNQLIANGSFVGAGVFIALLIRSMQRVKKLDKFEKMI 733
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aary13g03349 733 CDD ABC1-ADCK3-like 263 510 - -
Aary13g03349 733 SUPERFAMILY Protein kinase-like (PK-like) 265 513 IPR011009 -
Aary13g03349 733 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 48 661 IPR050154 GO:0046467(PANTHER)|GO:0055072(PANTHER)|GO:1901031(PANTHER)
Aary13g03349 733 Pfam ABC1 atypical kinase-like domain 263 509 IPR004147 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aary13g03349 K03688 ubiquinone biosynthesis protein
Aary13g03349 K08869 aarF domain-containing kinase
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Event-related genes

Select Gene_1 Gene_2 Event_name
6383 Aary13g03349 Aary17g02492
6384 Aary13g03349 Aary2g01683
6385 Aary13g03349 Aary7g02460
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aary Aary-Chr13:200877955 Aary2g01036 Aary-Chr2:86249192 dispersed
Aary Aary-Chr13:200877955 Aary10g03455 Aary-Chr10:197267277 transposed