Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aary13g03354 | ATGGCGGCTGTTTCCAGTAGTATCACTGGTGGTGAAAGAAAGATTTTACAATCATTTGTTTGTGCAAGCCTAAGTTCTACCCATAGAAAACCTTGCCTTGGTAATTTAGCTTCTTCCGCTAGTGCTTCAAAAGGCTTACTGGATAAAATTAGACTTGCATTCCAAACTAGATCTGCAACAAGTATGGCAACAAACATGGAAAGTTCATCAAAGGTTCCAGAAAATGAAGTTGATCATGTTGATATGCTAAATGCTTCTTTTGATGGTCATGGAGGAGTTATTGTGAACGTTAAAGAGGACATGGATGAAAATGTCTTTATCGCTTTACTTCGAACATCAATATCTCAATGGCGGCAACAGGGAAAGACGGGTGTTTGGCTTAAACTTACTATTGAACTTGTGAATCTTGTTAAGCCTGCAGTCCAGGAAGGATTTTGGTACCATCATGCTGAATCAACGTATTTGATGCTCGTGTATTGGATTCCTGAGACTAATCATACCCTCCCACCAAATGCTTCACATCGAGTTGGTGTTGCTTCTTTTGTAGTCAACGATAAAGGGGAGCTTCTCGTAGTGCAAGAGAAAAGTGGAGTGTTCAAAGGCACAGGAGTCTGGAAGTTACCAACTGGTACTGTTGAGGAGGGTGAAGATATATCTGTAGCTGCAATCAGGGAAGTGAAAGAAGAGACTGATATTGATACAGAATTCATGGAGGTCCTAGCATTTAGGCAAAGCCACAAGTCATTTTTTAGCAAGTCCGATTTAATGTTTGTGTGTATGCTCAAACCAAAGTCTTCCGTTATTGAGAAACAAGATTCAGAAATTGAAGCAGCACAGGGTGAAGATATATCTGTAGCTGCAATTAGGGAAGTGAAAGAAGAAGCTGGTATTGACACTGAATTCTTGGAAGTCCTTGCATTCAGGCAAAGCCACAAGTCATTTTTTAGCAAGTCTGATTTAATGTTTGTGTGTATGCTAAAACCAAATCAATATGCGAACCAGCCCTTTGTAAAGAAGCACAAGTCATTCGACTACATTGCTAAAATATGCATGGCAAAAAAAGATAACAAATATGTTGGTTTTTCTGCATTGTCTACAGAGAATGCTACATCCGCCAAGAAGAGCTATTTGTATTCTGGTTATCAAGAGCTCTTGATTTCTATATTTAATATACACTAA | 1179 | 38.93 | MAAVSSSITGGERKILQSFVCASLSSTHRKPCLGNLASSASASKGLLDKIRLAFQTRSATSMATNMESSSKVPENEVDHVDMLNASFDGHGGVIVNVKEDMDENVFIALLRTSISQWRQQGKTGVWLKLTIELVNLVKPAVQEGFWYHHAESTYLMLVYWIPETNHTLPPNASHRVGVASFVVNDKGELLVVQEKSGVFKGTGVWKLPTGTVEEGEDISVAAIREVKEETDIDTEFMEVLAFRQSHKSFFSKSDLMFVCMLKPKSSVIEKQDSEIEAAQGEDISVAAIREVKEEAGIDTEFLEVLAFRQSHKSFFSKSDLMFVCMLKPNQYANQPFVKKHKSFDYIAKICMAKKDNKYVGFSALSTENATSAKKSYLYSGYQELLISIFNIH | 392 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aary13g03354 | 392 | FunFam | nudix hydrolase 2 | 80 | 166 | - | - | |
| Aary13g03354 | 392 | Gene3D | - | 80 | 165 | - | - | |
| Aary13g03354 | 392 | ProSitePatterns | Nudix box signature. | 210 | 231 | IPR020084 | GO:0016787(InterPro) | |
| Aary13g03354 | 392 | Pfam | NUDIX domain | 279 | 334 | IPR000086 | - | |
| Aary13g03354 | 392 | Pfam | NUDIX domain | 174 | 278 | IPR000086 | - | |
| Aary13g03354 | 392 | Pfam | Nudix hydrolase domain | 83 | 161 | IPR040618 | - | |
| Aary13g03354 | 392 | Gene3D | Nucleoside Triphosphate Pyrophosphohydrolase | 175 | 277 | - | - | |
| Aary13g03354 | 392 | Gene3D | Nucleoside Triphosphate Pyrophosphohydrolase | 278 | 358 | - | - | |
| Aary13g03354 | 392 | PANTHER | NUDIX HYDROLASE RELATED | 55 | 279 | IPR003293 | GO:0035529(PANTHER)|GO:0047631(PANTHER)|GO:0051287(PANTHER) | |
| Aary13g03354 | 392 | ProSiteProfiles | Nudix hydrolase domain profile. | 173 | 306 | IPR000086 | - | |
| Aary13g03354 | 392 | FunFam | Nudix hydrolase 8 | 175 | 280 | - | - | |
| Aary13g03354 | 392 | SUPERFAMILY | Nudix | 279 | 327 | IPR015797 | - | |
| Aary13g03354 | 392 | SUPERFAMILY | Nudix | 142 | 277 | IPR015797 | - | |
| Aary13g03354 | 392 | PRINTS | Anti-sense to fibroblast growth factor protein GFG signature | 133 | 151 | IPR003293 | - | |
| Aary13g03354 | 392 | PRINTS | Anti-sense to fibroblast growth factor protein GFG signature | 171 | 189 | IPR003293 | - | |
| Aary13g03354 | 392 | PRINTS | Anti-sense to fibroblast growth factor protein GFG signature | 259 | 283 | IPR003293 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aary13g03354 | K26956 | ADP-ribose/NAD+ diphosphatase [EC:3.6.1.13 3.6.1.22] | ||||
| Aary13g03354 | K03574 | 8-oxo-dGTP diphosphatase [EC:3.6.1.55] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Aary | Aary-Chr13:201412068 | Aary13g03357 | Aary-Chr13:201561181 | dispersed | |
| Aary | Aary-Chr13:201377627 | Aary13g03354 | Aary-Chr13:201412068 | proximal |