Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aary13g03452 | ATGATTAAGCAATTTCTTAAAAAGATTCCCAAGAAATCATCCTCAAAATCATCACACCATAATGATGATCAAAAACCCGATTCTAGCTCGAATAAGGCGAATATTTCTAGTGTTAAGTCTAGTGAAGTGGTGCAGATAGTTAATGAAGCTTCTTATGAAGCATTGCCTAGTTTTCGAGACGTATCAAGTTCCGAAAAACATAGTTTGTTCATTAAGAAAATGGATATGTGTTGTGTAGTGTTTGATTTTAACGACCCGTTAAAGAGTTCAAAAGAAAAAGATGTAAAGAAACAAACTTTACTTGAACTAGTTGAATATGTTTCTTCAGTAAGTTCCAAGTTTAATGAGGTTACAATATTGGAGATAACGAAAATGGTGTCTGTTAATTTGTTTCGGTCATTACCTAACTTAAGTAATGAAAGTAAGCTGCCGGATATATATGATCAAGAAGATGACGAGTTTGTTATGGATCCTTCATGGCCACATCTTCAAGTTGTGTACGAGTTTTTGCTTAGGTTTGTGGCCTCATCAGAGACTGATGCTAAAATTGCGAAAAAGTATATAGATCAGTCTTTCGTGTTAAAATTGCTTGATCTTTTTGATTCTGAGGATCAAAGGGAAAGGGAATATTTAAAGACGATTATGCATAGGATTTATGGCAAGTTTATGGTGCATCGGCCGTTTATTAGAAAAGCGATTAATAACATATTTTATCATTTTATTCTTGAGGCTGGTAAGCATAATGGGATAGCGGAAATACTTGAGCTTTTAGGTAGTATAATTAATGGATTTACGATGCCATTGAAGGAAGAACATAAGGTGTTTCTTGTTCGTGTGTTGATTCCGCTTCATAAGCCGAGGTATTTGTCTATGTATCAGCAGCAGCTTGTGTATTGTGTTAGTCAGTTTGTTGAAAAAGATAGTAAGTTAGCTGATACAGTGATTAGGGGGCTGTTAAAGTATTGGCCTGTGACTAATAGTGCTAAAGAAGTGATGTATCTTAGCGAATTGGAGGAAATTCTTGAAGTTACTAAGGCTGCAGAATTTGAAAAGTGTATGGTTCCTTTGTTTCGTCAGATTGGTCATTGCCTCAATAGTCCACATTTTCAGGTAGCAGAACGTGCGTTATTCCTATGGAATAACGAGCATATAAGGAATCTAATAATTAAAAACCGCAAGGTGATTCTGCCCCTCATCTTCTCCCCTTTGGAGAAAAACACAAAAGCTCATTGGAATCAAGCCGTTCAAACCCTAACCGTAAATGTCAGGAAAGTATTCTCAGATTTTGATCAATCATTATTCCAGGATTGTCTAGTCAGCTACCAAGAACACGAAAACAAGGTAAAGGAAAGCCTTGCAAAGCGACAGATGACTTGGAACCGCCTTGATGCCTTAGCAGCCTCCCAAACCAAGCCTATAGTCATCTCGATGTTTAACTCACCTGTGACTATGACGACCACCACTGCAGTAAAATAA | 1476 | 36.86 | MIKQFLKKIPKKSSSKSSHHNDDQKPDSSSNKANISSVKSSEVVQIVNEASYEALPSFRDVSSSEKHSLFIKKMDMCCVVFDFNDPLKSSKEKDVKKQTLLELVEYVSSVSSKFNEVTILEITKMVSVNLFRSLPNLSNESKLPDIYDQEDDEFVMDPSWPHLQVVYEFLLRFVASSETDAKIAKKYIDQSFVLKLLDLFDSEDQREREYLKTIMHRIYGKFMVHRPFIRKAINNIFYHFILEAGKHNGIAEILELLGSIINGFTMPLKEEHKVFLVRVLIPLHKPRYLSMYQQQLVYCVSQFVEKDSKLADTVIRGLLKYWPVTNSAKEVMYLSELEEILEVTKAAEFEKCMVPLFRQIGHCLNSPHFQVAERALFLWNNEHIRNLIIKNRKVILPLIFSPLEKNTKAHWNQAVQTLTVNVRKVFSDFDQSLFQDCLVSYQEHENKVKESLAKRQMTWNRLDALAASQTKPIVISMFNSPVTMTTTTAVK | 491 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aary13g03452 | 491 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
| Aary13g03452 | 491 | SUPERFAMILY | ARM repeat | 68 | 447 | IPR016024 | - | |
| Aary13g03452 | 491 | PANTHER | SERINE-THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B | 3 | 470 | IPR002554 | GO:0000159(InterPro)|GO:0007165(InterPro)|GO:0019888(InterPro) | |
| Aary13g03452 | 491 | Gene3D | - | 63 | 464 | IPR011989 | - | |
| Aary13g03452 | 491 | FunFam | Serine-threonine protein phosphatase 2A regulatory subunit | 62 | 465 | - | - | |
| Aary13g03452 | 491 | PIRSF | PP2A-B56 | 3 | 490 | IPR002554 | GO:0000159(InterPro)|GO:0007165(InterPro)|GO:0019888(InterPro) | |
| Aary13g03452 | 491 | Pfam | Protein phosphatase 2A regulatory B subunit (B56 family) | 55 | 466 | IPR002554 | GO:0000159(InterPro)|GO:0007165(InterPro)|GO:0019888(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aary13g03452 | K11584 | serine/threonine-protein phosphatase 2A regulatory subunit B' |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Aary | Aary-Chr13:207276900 | Aary17g01026 | Aary-Chr17:87256362 | dispersed | |
| Aary | Aary-Chr13:207276900 | Aary17g02444 | Aary-Chr17:146542507 | wgd | |
| Aary | Aary-Chr13:207276900 | Aary5g02905 | Aary-Chr5:177034608 | wgd | |
| Aary | Aary-Chr13:207276900 | Aary9g02570 | Aary-Chr9:155567040 | wgd |