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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aary13g03458 ATGGAGGAGGTTATGACGTTAGCAGATGCAGCGTACCATGCTAACAAGGTGATCACAGCTGTGACACCACCATCGTCCTCAAGAGGTCCAGTCATGTTGTTGTATAGTGTTCCTTTGTTATCAGCGTTACTTGCGTTTGCTATTGCTCAGTTTCTTAAAGTCATTACTACTTGGTATAAGGAAAAGAGATGGGATCCTAAAAAGATTGTCGGCTCTGGTGGAATGCCATCATCTCATTCTTCAACTGTTGTGGCACTTGCAGTATCTATTGGTCTACATGAGGGAATTGATTCATCATTGTTTGCAATTGCCGTTGTCATGGCTTTTATTGTTATGTATGATGCAACTGGAGTCAGACTCCATGCTGGTCGCCAAGCTGAAGTGTTGAACCAAATAGTGTGTGAATTTCCTCCTGAGCACCCTTTATCCACATCCATACCTCTACGTGATTCGCTTGGGCATACTCCATTACAGGTGGTTGCAGGGGCCATACTAGGATGCATAGTGGCATTCGTGATGAAAGCAACTGACTAG 534 44.19 MEEVMTLADAAYHANKVITAVTPPSSSRGPVMLLYSVPLLSALLAFAIAQFLKVITTWYKEKRWDPKKIVGSGGMPSSHSSTVVALAVSIGLHEGIDSSLFAIAVVMAFIVMYDATGVRLHAGRQAEVLNQIVCEFPPEHPLSTSIPLRDSLGHTPLQVVAGAILGCIVAFVMKATD 177
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aary13g03458 177 Pfam Divergent PAP2 family 38 169 IPR003832 -
Aary13g03458 177 CDD PAP2-like 39 172 - -
Aary13g03458 177 PANTHER ACID PHOSPHATASE-VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN 22 175 IPR003832 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aary13g03458 K09775 uncharacterized protein
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Event-related genes

Select Gene_1 Gene_2 Event_name
168214 Aary5g02910 Aary13g03458
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aary Aary-Chr13:207685674 Aary7g00760 Aary-Chr7:38148410 dispersed
Aary Aary-Chr13:207685674 Aary5g02910 Aary-Chr5:177425686 wgd