AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aary13g03461 ATGACAGGAAAGAAGCGATTTGCTTCGAAATCAGTGATATTGTTATTGGTATTAATATGTATCGTTGTATTAGTCGGGTTATTATCTCAATTTAAGCTTCAATCATCTACTGAATTCAGTTATAAAGATGACTTAATCGAGTATCCGGTGAAGGATAAAATTGCTTTTTTATTTCTTGTTAGAGATAACCTTCCTCTTGATTTCCTTTGGCATAATTTCTTTAAGAATGCAGATCCTGAGAATTTCACAATCTACATACACTCGAAGCCTGGTATTCTGTTCGACAAGTCTGTTACCAAATCAGCCTTCTTCTACAATCGGCAATTGAGAAACAGTGTTGAGGTTGGTTGGGGTACGCCAACTATGGTTGAAGCAGAGAAGCTGTTGTTCAAGGCGGCGGCCCTTGACGATCCACAAAATTCGATATTCGTTCTCCTCTCTGACAGCTGTGTCCCTCTGTATAATTTCAGTTATATATACAAATATCTCGTTTCATCTCCACGAAGTTTTGTGGACAGCTTTATAGATGCCACGGATGATCCAAGGGAAAAACGCTATAATCCAGAGATGTCCCCTGACATACCCGAAGACAAATGGCGGAAAGGATCCCAGTGGATCACATTGGGCAGAAGGCATGCAGAGGTGGTTGCATATGATCAGGATGTTTTCCCAATCTTTGAGAAACACTGTAAGCGGCGACCACTTCTAGACTTGAGCAAAGGAAATGAGTCTCTTATAGAACAACAGCAACACAATTGCATCCCAGATGAGCATTATGTGCCAACCTTACTTGCAATGCTTGGATATGAAGTTCAATTGGAGCGAAGAACATTAACTTATTCTTTATGGAACCAGTCTACTGAACCGATGAATACACAAGCCTGGCACCCTGTAACATTTGGTTTTGCAAGTGCCAGCCAAAAGAACATTCAAGATATTAAGGATATTGACCATGTTTATTTTAAGTCTGAAAACCGGACTGAATGGTGTGGTACTAGATCTAGTAGCGGTCCTTGTTATTTATTTGCTAGGAAATTTTCGCGTGGTGCAGCCATGCGACTTTTGACCAATGGGGTAGTTGGTCCCTATGATCCCAGCACATTGTTCTTAGACTCAACATAG 1122 40.64 MTGKKRFASKSVILLLVLICIVVLVGLLSQFKLQSSTEFSYKDDLIEYPVKDKIAFLFLVRDNLPLDFLWHNFFKNADPENFTIYIHSKPGILFDKSVTKSAFFYNRQLRNSVEVGWGTPTMVEAEKLLFKAAALDDPQNSIFVLLSDSCVPLYNFSYIYKYLVSSPRSFVDSFIDATDDPREKRYNPEMSPDIPEDKWRKGSQWITLGRRHAEVVAYDQDVFPIFEKHCKRRPLLDLSKGNESLIEQQQHNCIPDEHYVPTLLAMLGYEVQLERRTLTYSLWNQSTEPMNTQAWHPVTFGFASASQKNIQDIKDIDHVYFKSENRTEWCGTRSSSGPCYLFARKFSRGAAMRLLTNGVVGPYDPSTLFLDST 373
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aary13g03461 373 PANTHER CORE-2-I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 25 355 IPR044174 GO:0016757(InterPro)
Aary13g03461 373 Pfam Core-2-I-Branching enzyme 54 313 IPR003406 GO:0016020(InterPro)|GO:0016757(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aary13g03461 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aary Aary-Chr13:2757058 Aary13g03461 Aary-Chr13:207807999 dispersed
Aary Aary-Chr13:207807999 Aary15g02183 Aary-Chr15:170784921 dispersed
Aary Aary-Chr13:7938740 Aary13g03461 Aary-Chr13:207807999 wgd
Aary Aary-Chr13:207807999 Aary5g02914 Aary-Chr5:177796168 wgd
Aary Aary-Chr13:207807999 Aary5g00078 Aary-Chr5:2472812 wgd