AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aary13g03586 ATGGCAAAACACACAATCTCCCAACAAGCATTCGACGAAATGGTTGAGGAAAACATAACAGACCTAGGCATGGACCCAACCGAAGCCTTAGCAGACGCAATCGAAACCCTCACTTTACAAAACGTAGATCTCTCCGGTATCATCACCTCCACCCTTCCAGGCCAGCCCAACCCTGTCCTCCAATCACTTGACAGAATCAAGGACGAGCTTTTGAAAAATGATGATGATCAGTTGGTTGGGTTGTTGGATGAATTGGTTGAGATGTGTGAGGGGGAGGGGGAGGGAAATGTGGCGGTTGCGGCGAGAAATGGGGCGGTTGAGTTGATGTGTGAGGTTTGTGGGAGGAGTCGGGGGAATGGGGTGAGGGTCCGAGTTTCGGCGTTGAATGCGCTGGCTTTGTTTCTTTATGATATTCAAAGTACGGAAATATTTCGAAAGAGTGGAGGGCCGAAAATGGTGGTCGGTATTTTGAATGATGGACTTGAAAATGTGAATGTATTGAATAGTGGTTTTGCGGTTGTTGCTGCGGCTGCAACTGGTAATGAAGTTATTAAGGAGTCTTTTGTTGAGTTACATATAGATGAGTTAATGGTTAATGTGATGAGGAAACATAGTAAAGGGAGTATCCCAAGCTTGTATGATGCTATTCGAGTGCTTTTGGCAGCTGATGATAACCGAGTAGTGGCTTCACAAGTTTTTGGCTATGCTCGACAATTTGCGAAAATTGGAATTGCGGAAGCTCTTGTGGAGTCACTTAAAGATGGGCTTAGCTCGCCAAGTCTGGTATCTGCAACTATTGCACTAAAGGCCGTTGCAGTGAATGATGACATATGCAGATCCGTTGCTGAAAATGGTGGTATAGATTCATTGCTTGTTTGTATTGATGACGCTGGTGTACAGGGGAACAGCATTGTGGCTAAAGCTTGCTGCTCCCTATTATCGAAGTTGGCAGGAAGTGACTTTAATAAGAGTGCTATTGTTGAAAGGGGAGGGTTGAATAGGCTCATAACACTTTCTGGCAGACTTGCTGACGATCCTTCTGTCATCCAAGAGGTGATGACTATCATATGTACGCTCTGCCTGCGATCACCAGGAAATGCAACCTTAGCCATAGAAGCAGGAGCAGGAGATCTTGCAATCCAATCTATGCAGAAGTTCCCTGAGGCATATCAGCTGCAGAAAAACTCTTGTCTCATGATCCGTAATCTTGTTGCCAGGAATCCAGAGAACAGGACTCTTTTGCTAGGTAATGGTATTGAGAAGATCATACGTAAGGCCAAAGAAAACCACAAAAGCTGCAAAGACGCAGCTACCGCTGCTCTTAGGGACTTGGGGCTTGATAACTACAACTCGTAG 1356 45.5 MAKHTISQQAFDEMVEENITDLGMDPTEALADAIETLTLQNVDLSGIITSTLPGQPNPVLQSLDRIKDELLKNDDDQLVGLLDELVEMCEGEGEGNVAVAARNGAVELMCEVCGRSRGNGVRVRVSALNALALFLYDIQSTEIFRKSGGPKMVVGILNDGLENVNVLNSGFAVVAAAATGNEVIKESFVELHIDELMVNVMRKHSKGSIPSLYDAIRVLLAADDNRVVASQVFGYARQFAKIGIAEALVESLKDGLSSPSLVSATIALKAVAVNDDICRSVAENGGIDSLLVCIDDAGVQGNSIVAKACCSLLSKLAGSDFNKSAIVERGGLNRLITLSGRLADDPSVIQEVMTIICTLCLRSPGNATLAIEAGAGDLAIQSMQKFPEAYQLQKNSCLMIRNLVARNPENRTLLLGNGIEKIIRKAKENHKSCKDAATAALRDLGLDNYNS 451
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aary13g03586 451 Gene3D - 63 451 IPR011989 -
Aary13g03586 451 SMART arm-5 274 318 IPR000225 GO:0005515(InterPro)
Aary13g03586 451 SMART arm-5 363 405 IPR000225 GO:0005515(InterPro)
Aary13g03586 451 SMART arm-5 319 361 IPR000225 GO:0005515(InterPro)
Aary13g03586 451 PANTHER UNCHARACTERIZED 5 447 - -
Aary13g03586 451 SUPERFAMILY ARM repeat 76 444 IPR016024 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aary13g03586 K24166 armadillo repeat-containing protein 6
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aary Aary-Chr13:215340877 Aary5g03131 Aary-Chr5:190444390 wgd