Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aary13g03627 | ATGGCGATTAATGTATCATCATCATCTTTGTGTTATTCCACTAATCATGGATCTTCGTTGTTTTTTGCAAACACTACTAATTATCTCAAGATCAATAATAGTAATTATTATTCAAATGTGTCATCGATTAAACACCGATCTGATCTACGTGTCATGTCTTCTATGCGTCGACCCTTAAAAGCAACAGTAGTGACTGGACAGTCATGGAACACATCAGTGCTCGACAGCAAAACACCAGTACTAGTTGAGTTCTACGCCAGTTGGTGTGGACCATGCCAGATGGTGCACCGAGTGATTGATGAGATTGCAGGCGAGTATGCTGGTAAGGTCAAGTGTTTCGTGCTGAATGCTGACCAAGACCCACTAATCGCTGAAGAATATGACATCAAGGCTGTACCCATTGTGCTGGTGTTCAAGAACGGTCAGAAATGTGAGTCGGTGATTGGGACCATGCCGAAAGAATTCTACGTGGCTGCTATCGAAAGAGTCTTGTCATCTTGA | 501 | 42.71 | MAINVSSSSLCYSTNHGSSLFFANTTNYLKINNSNYYSNVSSIKHRSDLRVMSSMRRPLKATVVTGQSWNTSVLDSKTPVLVEFYASWCGPCQMVHRVIDEIAGEYAGKVKCFVLNADQDPLIAEEYDIKAVPIVLVFKNGQKCESVIGTMPKEFYVAAIERVLSS | 166 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aary13g03627 | 166 | PRINTS | Thioredoxin family signature | 88 | 97 | - | - | |
| Aary13g03627 | 166 | PRINTS | Thioredoxin family signature | 80 | 88 | - | - | |
| Aary13g03627 | 166 | PRINTS | Thioredoxin family signature | 128 | 139 | - | - | |
| Aary13g03627 | 166 | FunFam | Thioredoxin | 55 | 166 | - | - | |
| Aary13g03627 | 166 | SUPERFAMILY | Thioredoxin-like | 58 | 165 | IPR036249 | - | |
| Aary13g03627 | 166 | CDD | TRX-family | 72 | 161 | - | - | |
| Aary13g03627 | 166 | ProSitePatterns | Thioredoxin family active site. | 81 | 99 | IPR017937 | - | |
| Aary13g03627 | 166 | ProSiteProfiles | Thioredoxin domain profile. | 55 | 166 | IPR013766 | - | |
| Aary13g03627 | 166 | Pfam | Thioredoxin | 62 | 160 | IPR013766 | - | |
| Aary13g03627 | 166 | PANTHER | GEO12009P1 | 54 | 164 | - | GO:0005737(PANTHER)|GO:0015035(PANTHER) | |
| Aary13g03627 | 166 | Gene3D | Glutaredoxin | 61 | 165 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aary13g03627 | K03671 | thioredoxin |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 4482 | Aary10g05075 | Aary13g03627 | |
| 6442 | Aary13g03627 | Aary2g01622 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Aary | Aary-Chr13:218104856 | Aary7g02722 | Aary-Chr7:222557484 | dispersed | |
| Aary | Aary-Chr10:279478692 | Aary13g03627 | Aary-Chr13:218104856 | wgd | |
| Aary | Aary-Chr13:218104856 | Aary2g01622 | Aary-Chr2:121373332 | wgd |