Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aary13g03647 | ATGGCTAGTCAAAGCATTCAAGGCGGTCTCCTTGAAGTCACCGTTGTTAGTTGCAATAAACTAAGGGATACCGAATGGTTCTCAAGGCAAGATCCTTACGTAAGTATCGAATATGGTAGCTATAGATCTTCAACTCGTACTTGTACAGATGGAGGCAAGAGCCCTACATTTCAAGAGAAATTTGTGTTTAGCTTGATTGAAGGATTAAGAGACATAAATGTTTCAGTTTGGAATAGCAATACACTTACACACGATGACTACATTGGTGGCGGAAGAATTCCATTGACAAAGGCTTTTTCTCAAGGATTTGATGATAGTAGTTGGCCGTTACAGAGTAAAACCGGAAGGCATGCCGGAGAGGTCCGACTGATAATGCATTATTCCAATGCCAATAATCCTGGTGCTCAAAAGCCATCAAAAGGTCTTGCTCCACAAGGTGCACCTTCCGGATCCATGTACCCAGCAGCGCCCCCATCCATGTACGGCGCACCACCTCCGGGGTCTATGTACCCTACACCACCACCAGGGTCCATGTACCCCTCGTACCCCCCAAATCCAAGTGCGTATCCACCCACTCCATACCCAAATCAAATGCCTAACTATCCTCCCACACCATATCCTTATGGATCACAGTATCCCCCAGGTTCTCCATTCCCAGGAACGTATCCTCCACCACCTTATTGA | 684 | 46.49 | MASQSIQGGLLEVTVVSCNKLRDTEWFSRQDPYVSIEYGSYRSSTRTCTDGGKSPTFQEKFVFSLIEGLRDINVSVWNSNTLTHDDYIGGGRIPLTKAFSQGFDDSSWPLQSKTGRHAGEVRLIMHYSNANNPGAQKPSKGLAPQGAPSGSMYPAAPPSMYGAPPPGSMYPTPPPGSMYPSYPPNPSAYPPTPYPNQMPNYPPTPYPYGSQYPPGSPFPGTYPPPPY | 227 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aary13g03647 | 227 | Gene3D | C2 domain | 8 | 129 | IPR035892 | - | |
| Aary13g03647 | 227 | Pfam | C2 domain | 9 | 100 | IPR000008 | - | |
| Aary13g03647 | 227 | CDD | C2 | 11 | 108 | - | - | |
| Aary13g03647 | 227 | ProSiteProfiles | C2 domain profile. | 1 | 109 | IPR000008 | - | |
| Aary13g03647 | 227 | PANTHER | CONSERVED SERINE PROLINE-RICH PROTEIN (AFU-ORTHOLOGUE AFUA-2G01790) | 1 | 226 | IPR052981 | - | |
| Aary13g03647 | 227 | MobiDBLite | consensus disorder prediction | 130 | 151 | - | - | |
| Aary13g03647 | 227 | SUPERFAMILY | C2 domain (Calcium-lipid-binding domain, CaLB) | 6 | 129 | IPR035892 | - | |
| Aary13g03647 | 227 | SMART | C2-3c | 10 | 107 | IPR000008 | - | |
| Aary13g03647 | 227 | MobiDBLite | consensus disorder prediction | 163 | 227 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aary13g03647 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 4468 | Aary10g05062 | Aary13g03647 | |
| 6444 | Aary13g03647 | Aary17g02297 | |
| 170865 | Aary13g03647 | Aary5g03153 | |
| 173171 | Aary5g03153 | Aary13g03647 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Aary | Aary-Chr13:219561430 | Aary17g02297 | Aary-Chr17:141188526 | dispersed | |
| Aary | Aary-Chr10:277600666 | Aary13g03647 | Aary-Chr13:219561430 | wgd | |
| Aary | Aary-Chr13:219561430 | Aary5g03153 | Aary-Chr5:192563370 | wgd | |
| Aary | Aary-Chr13:219561430 | Aary9g02438 | Aary-Chr9:152108463 | wgd |