Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aary5g02610 | ATGGAAACCTTGAAAAATTCGTTTCATGATACCCGCCGCTGCAACGCAATAGAAAAACTGAAAAAATACACAAAAATGCCGTTTCCGATATTTGATGGAAACATTTACATATCAATCAGGACTCCTTATCTAAAGGTAACATACGATCCACCCACCTCGGATGAGGTGAATAGCAATATCATACCATCTGCGTCTGTGCTAAGGCAGCTGGCTATAGGTGTTGAGACCACAAAAGTTATAAAGTCAATGAAGGATCTGATAATAGTATCAAGAGATTCTTCACCTGTGAAGGAGAGATCTGGTTTGAGCTTATCTGCTGTAAAGTCATTTGTGGTGGGGGATAGAGATGATAAATTTGCTCTTGAATTCGGTCGTGATGAAAAAGTAATGTCTTTTATCCAGTCTCTGCAGAATCCAGAAGGAAATCTTTCTCGAAGGAAGACTGGCCCCCTCTTTGAGACGTATACGAGCATTACGAATTTTGCCAAAGAGCTTCATGGTGCTCCTCCCGAGAACTTTGTTACAGAGCTGGCTGAAGCCGTTGGAAGCTTAAGAACTTTGAAGAAAATGGCATTGTTTTGGTCCCGGGTCGTCGAAGAATTGAGAAGGCTATGGAGTGAAGGACAATATATTCCTGGAATCCCTGAAGATAAAGTTCCAGATATAAATTCCTGTTTGTTATATCAGCAGTTGCAGGTTATAAATTGCTGTATATCTAGAAAACGACGACGTGCTATTGTCACAGAATCATTAGAAGCTGTTTTAAAGCAAGCTAAAAATAACGCCGGCAAGTCTGCTCCTGGAGGAAATACGGAAAACCCTCTTGTGTATGCTAAAGATAGCTCTGGTGAACATGTGCTTCGATTAGGAGCAGACAAACAGCTTGAGAACACGACACTTTTGGATACCGGTGAACCTGTGTATACTCCTGTTTTGCAGGAAGGGCCTTTACTCACGGAAGACATTATTAAAGAAACAGAGGAATTTGTTTTACGTACCGGAAGCGTTGGTGCAGGCTGCTCTCAGCTTCTCTCGGATATGCAGGCTTTCAAGGCAGCAAATCCAGGGTGCATTTTAGAAGATTTTATTAGATGGCACTCACCCCCTGATTGGACCGAATCATTAATGGATGATGATACTAAAGAATCTGACGATGAGAATCTTTCGCCTTCAAGAGGATACCTGAGTATTCGTATGCGGAAAGCAGGTAATTTGTGGCGAGAACTTTGGGAAACTGCAAAACCGATACCTGCTGTTAGACAGTCACCTCTATACTACGAGGATTTATCTGTGGAAGGGATTCTGCATGGCTTTGAGAGTATCTCACCTTCTGGTTTCTTTGAGCAGCTCTTTCTTTCTCTTCTCAGTTCTGGATGTGCAATTGCTGAGGCCAGAATATCGAGTAATGAATATCTGTACAACCTGTTCAAGGAGTCCAAAGACTATATCATCATTACCTGTCAAGGTAAAAATTGGGTTGAGAAAACGCAAGAGATATGCCAGGTCTATGAGACGGTGACAGTGATGGCATTGAACCCAGATATGGTTATAAGGCTCACGAAGCCGAAGCATGATCAAAACCCTGCAAGCGTCTTAGAAACAGAATCAGAGGACCCAAAGAGCCAAAAAGACAGCCCTACAACAGTACTGTGCCCCACAATGTTTTCAAAGAAGCCACCCAAGCCTACATCCCCTTATAATGAGAAACAAGTTGGTTTCTTTGATAATGAACGGATAGCAGATGCGGTCCTGCCCTTCAAAATAGTGTAG | 1770 | 42.43 | METLKNSFHDTRRCNAIEKLKKYTKMPFPIFDGNIYISIRTPYLKVTYDPPTSDEVNSNIIPSASVLRQLAIGVETTKVIKSMKDLIIVSRDSSPVKERSGLSLSAVKSFVVGDRDDKFALEFGRDEKVMSFIQSLQNPEGNLSRRKTGPLFETYTSITNFAKELHGAPPENFVTELAEAVGSLRTLKKMALFWSRVVEELRRLWSEGQYIPGIPEDKVPDINSCLLYQQLQVINCCISRKRRRAIVTESLEAVLKQAKNNAGKSAPGGNTENPLVYAKDSSGEHVLRLGADKQLENTTLLDTGEPVYTPVLQEGPLLTEDIIKETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFIRWHSPPDWTESLMDDDTKESDDENLSPSRGYLSIRMRKAGNLWRELWETAKPIPAVRQSPLYYEDLSVEGILHGFESISPSGFFEQLFLSLLSSGCAIAEARISSNEYLYNLFKESKDYIIITCQGKNWVEKTQEICQVYETVTVMALNPDMVIRLTKPKHDQNPASVLETESEDPKSQKDSPTTVLCPTMFSKKPPKPTSPYNEKQVGFFDNERIADAVLPFKIV | 589 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aary5g02610 | 589 | PANTHER | RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT | 57 | 526 | IPR045700 | GO:0005096(InterPro)|GO:0005096(PANTHER)|GO:0043547(PANTHER)|GO:0043547(InterPro) | |
| Aary5g02610 | 589 | MobiDBLite | consensus disorder prediction | 526 | 569 | - | - | |
| Aary5g02610 | 589 | MobiDBLite | consensus disorder prediction | 528 | 542 | - | - | |
| Aary5g02610 | 589 | Pfam | Rab3 GTPase-activating protein catalytic subunit | 287 | 439 | IPR026147 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aary5g02610 | K18270 | Rab3 GTPase-activating protein catalytic subunit |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 6869 | Aary15g00549 | Aary5g02610 | |
| 9833 | Aary5g02610 | Aary7g00749 | |
| 174874 | Aary5g02610 | Aary13g03130 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Aary | Aary-Chr13:185282459 | Aary5g02610 | Aary-Chr5:150597026 | wgd | |
| Aary | Aary-Chr15:26701059 | Aary5g02610 | Aary-Chr5:150597026 | wgd | |
| Aary | Aary-Chr5:150597026 | Aary7g00749 | Aary-Chr7:37630875 | wgd |