AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aary5g02624 ATGGCTGATTTTGAAGCACCTTCATTCTCTTTAGGTTTTGATTTTGATTCAGAAGATGATATAATAAACCTAGTTGTCGATGATTCGGATCCTGAATATCTTCCGGACCCGAAGCGTTCCTGCCGTCGGGTCACCGACAATGCCACGTCATCATCATCATCTTATGTTCCGCTGCGTACAGATGAAAAACTTCATACACAACAGAGTGCTGAGTGTACCAGTTCAACGTTCCAACCAGATAGACTAAAAGAAAATGTTTCGAATGCTCGGGGAGCGGTCTCAATAAGCTCCATAGATATTGATAAGTCTCTTCCCTATGCACATCATTATTTTTTCCACGATGATAGAAGGATCCAGGAGCTTGTCCGAATTCGCCTACCTTATTTTTCCCCTTTGGATGACCTGTCAAATAGTGACCTTGAGCAGCCGAGTACATCAAATATCGATTACATGGGCCAATTTAGGTGTGGTGAAAGCTTAAAACAAGATTCTAGAAATATTAAGGGGATGAAAAGCTCAAATAGTAGGAAGAATTCAAGAAAATTAAAGAATGAAGATACGTCGGAAGGTTGGGTGAATCCGAAGGCTGGTGTTGATAAAGTGACAACAAAAAGAGCTGTGAATAGAAAGGGTCATTCAGCCCATTTAAATTCGGGGCATTGGATAACAGGCGCAGATGGAAGGAAAGTCTATGTTGGTAAAAAAGGTCAGGAGCTGACCGGGCGAGTTGCATACATGCAGTACAAAAAGGCTTAG 756 41.8 MADFEAPSFSLGFDFDSEDDIINLVVDDSDPEYLPDPKRSCRRVTDNATSSSSSYVPLRTDEKLHTQQSAECTSSTFQPDRLKENVSNARGAVSISSIDIDKSLPYAHHYFFHDDRRIQELVRIRLPYFSPLDDLSNSDLEQPSTSNIDYMGQFRCGESLKQDSRNIKGMKSSNSRKNSRKLKNEDTSEGWVNPKAGVDKVTTKRAVNRKGHSAHLNSGHWITGADGRKVYVGKKGQELTGRVAYMQYKKA 251
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aary5g02624 251 PANTHER RHO GTPASE-ACTIVATING PROTEIN 1 40 - -
Aary5g02624 251 MobiDBLite consensus disorder prediction 166 195 - -
Aary5g02624 251 MobiDBLite consensus disorder prediction 28 77 - -
Aary5g02624 251 MobiDBLite consensus disorder prediction 44 77 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aary5g02624 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
84787 Aary Aary5g02624 Aary-Chr5:151662209 Aary7g03188 Aary-Chr7:244952847
141568 Aary Aary15g03008 Aary-Chr15:222522190 Aary5g02624 Aary-Chr5:151662209
153463 Aary Aary5g02624 Aary-Chr5:151662209 Aary7g03173 Aary-Chr7:244317615