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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aary5g02635 ATGCATGATTTTTGCTTCACAATTCCATATGGAATGATAGTGTTTTGTGGTGGGATAATTGGGTTTGTAAGGAAAGGTAGTACGACGTCGTTAGCTGGCGGTGTTGGCACTGGATTGTTGCTTTTTATTGCTTCTTATTTGACTTTATCTGCTTTTCATAAGAAAAAGAATTCATGGTTTGGCTTGCTTCTTGAAACTGTTATTGCTGCTACTCTCACATGGGTTATGGGACAAAGATTTGCCGAAACTTCCAAGATAATGCCTGCTGGTGTTGTTGCCGGTATCAGTGGAGTGATGACAGCATTTTATCTATACAAGATTGTCACTGGAGGCAACCATTTTCCAGCCAAGACTGAATGA 360 40.28 MHDFCFTIPYGMIVFCGGIIGFVRKGSTTSLAGGVGTGLLLFIASYLTLSAFHKKKNSWFGLLLETVIAATLTWVMGQRFAETSKIMPAGVVAGISGVMTAFYLYKIVTGGNHFPAKTE 119
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aary5g02635 119 Gene3D - 1 111 IPR044890 -
Aary5g02635 119 PANTHER TRANSMEMBRANE PROTEIN 14, 15 1 108 IPR005349 GO:0009706(PANTHER)|GO:0015245(PANTHER)|GO:0015908(PANTHER)|GO:0016020(InterPro)
Aary5g02635 119 Pfam Transmembrane proteins 14C 6 103 IPR005349 GO:0016020(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aary5g02635 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
174886 Aary5g02635 Aary13g03151
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
135476 Aary Aary13g03151 Aary-Chr13:186604465 Aary5g02635 Aary-Chr5:151878356