AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aary5g02751 ATGACATCCCGAATCATCCTCCGTACACTCAAATCCACCTCATCCAACCTCCTCCGTCTCCGCCCACTCACATCCGTCGCCGCCGTTAACCTTCGTCAATGCGCCGTCACGAATAACAATGTTCGTTCATACTCGACACGTCAGACGACGTCATCGTTGAATGACCCAAACCCTAACTGGTCAAACAGGCCGCCAAAAGAGACGATATTGTTAGATGGATGTGATTTTGAACATTGGCTTGTGGTTGTTGAGAAGCCTGAGGGAGAGCCTACTAGAGATGAGATTATTGACAATTATATTAATACTTTGGCTAAGGTTGTTGGAAGTTATGACGAAGCAAGGATGAAGATCTACTCGGTTTCAACAAGATGCTATTATGCTTTTGGAGCCCTTGTGTCTGAAGAAGATTCTTACAAGCTTAAGGAATTACCTGGAGTTCGTTGGGTGCTCCCTGATTCTTACTTGGATGTTAAAAACAAGGATTACGGAGGTGAGCCATTTATTGACGGAAAGGCTGTTCCATATGACCCAAAGTACCATGAAGAGTGGATCAGGAACAATACTCGTGCCAATGAAAGGAACAGAAGGAATGACAGGCCTCGCAACTTTGACAGAACAAAAAATTTTGAGAGGAGAAGAGAGAACATGCAAACCAACTGTGGTCCCCCAGGAGGTCCACCACCTAGCAACATGGGAGGTCCACCACCTAGCAACATGGGAGGTCCGCCGTCAAACATGGGTGGACCTCCACCCAACATGGGAGGACAACCACCTAACATGGGCATAAGACCACAAGGTGGTAATATGGGTGGTCAACCACCCAACAACTGGAATAATGGGCCACCACAACATTATGGCGGTGGGTTGTCACATATGGGAGGCGGGATGCCGCCTCAAAACAACATGGGTGAAGGAATGAGGCCTCAGAACATGGCTGGAGGGATGCCTAATAGTGCTCCTCCTAACTACCAGCAGCAGGGTCAGTATGGGTCAAATAATGGAGGAATGCCATATCAATCTGGTCCTGGGCCGAACAGTTACCCTCCCAATGTAGGTGGTGGAAACCCTTACCAGAATCAGAATGTTCCTGGAAGAGACATGCCCCCATCCAACTATGAATGA 1122 47.95 MTSRIILRTLKSTSSNLLRLRPLTSVAAVNLRQCAVTNNNVRSYSTRQTTSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVVEKPEGEPTRDEIIDNYINTLAKVVGSYDEARMKIYSVSTRCYYAFGALVSEEDSYKLKELPGVRWVLPDSYLDVKNKDYGGEPFIDGKAVPYDPKYHEEWIRNNTRANERNRRNDRPRNFDRTKNFERRRENMQTNCGPPGGPPPSNMGGPPPSNMGGPPSNMGGPPPNMGGQPPNMGIRPQGGNMGGQPPNNWNNGPPQHYGGGLSHMGGGMPPQNNMGEGMRPQNMAGGMPNSAPPNYQQQGQYGSNNGGMPYQSGPGPNSYPPNVGGGNPYQNQNVPGRDMPPSNYE 373
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aary5g02751 373 PANTHER MULTIPLE ORGANELLAR RNA EDITING FACTOR 2, CHLOROPLASTIC-RELATED-RELATED 23 217 IPR039206 GO:0005739(PANTHER)|GO:0016554(InterPro)|GO:0080156(PANTHER)
Aary5g02751 373 MobiDBLite consensus disorder prediction 315 340 - -
Aary5g02751 373 MobiDBLite consensus disorder prediction 45 64 - -
Aary5g02751 373 MobiDBLite consensus disorder prediction 351 366 - -
Aary5g02751 373 Pfam Multiple organellar RNA editing factor 1, MORF domain 76 167 IPR054059 -
Aary5g02751 373 MobiDBLite consensus disorder prediction 190 214 - -
Aary5g02751 373 MobiDBLite consensus disorder prediction 221 257 - -
Aary5g02751 373 MobiDBLite consensus disorder prediction 269 283 - -
Aary5g02751 373 MobiDBLite consensus disorder prediction 190 373 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aary5g02751 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
9267 Aary2g01755 Aary5g02751
9307 Aary2g01911 Aary5g02751
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aary Aary-Chr11:2640890 Aary5g02751 Aary-Chr5:161910113 dispersed
Aary Aary-Chr3:2418999 Aary5g02751 Aary-Chr5:161910113 dispersed
Aary Aary-Chr5:161910113 Aary6g02913 Aary-Chr6:181069198 dispersed
Aary Aary-Chr2:128061619 Aary5g02751 Aary-Chr5:161910113 wgd
Aary Aary-Chr2:134877542 Aary5g02751 Aary-Chr5:161910113 wgd