AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aary5g02754 ATGGAACTAGGAAGAATGTTGAGGTTGTTGCCTGAGGAAATGAGGCGTAAGGTTAATGAACATGAAGAGCTTCATCAATTGATTGAAGTTGTTATGGATTTGGGTCGGAAGCCCTTGGCGCGCTTTCCGTCTGGCGATTTTGTCTTGTCGGATGATTTGATTACTGTTGATGATCTTGAGCATGCCACTTCTTTGGTAGGTGATTTTGCTGTGGATAATCGAGCTGGGATTAGTAGAACTTTGCATCGGATTAGTGCTATTAGGAATCGTAAGGGGGTGATTATTGGGCTAACCTGTCGTGTTGGTCGAGCTGTATCGGGAAGTGCCAAATTATTGCAAGATTTGGTTAAAGATGGATCTTCTTTATTACTTATTGGGCCTCCAGGAGTGGGAAAAACTACAATTATCAGGGATATAGCTCGAATGCTTGCAAATGATTATAGGAAACGTGTCATGATTGTTGACACCTCAAATGAAATAGGTGGAGATGGTGATATACCGCACTCTGGTATAGGTAATGCTAGACGGATGCAAGTTCCTGATACGGATATGCAACATAAGGTGTTGATAGAAGCAGTTGAAAATCATATGCCTCAAGTGATTGTAATTGATGAAATTGGCACAAAACTTGAAGCAGCAGCTGCAAGCACTATTGCACAACGTGGGATTCAGTTAGTTGCAACAGCTCATGGTATTACGATAGAGAATTTAGTGATGAATCCTTCATTGGAGATGCTTGTTGGAGGAATACAGAGTGTGACATTAGGAGATGAAGAGGCGAATCGAAGGGGTGTACAGAAATCAGTGCTCGAGAGAAAAGGCCCATCTACTTTTGATTGTGCTGTGGAGATCATTTCGAGGCTTGAGTTGAGAGTTCATAGCAATCTGGAAGCAACAGTTGATGCTATTCTTTCTGGCCGTTCGCCAAACTACCAAGTTTGCAAGTTTAATCAGGGAGTGGAAAATATTACTTTACAAAGTGATCCAATTCCATATGATTCATTCATCAAGAAGAGTGTCACTTCGATTGAAGGCATTCCACAATGGATTGATGAAAAACGTACACCTGACAAACATGTTTCTAAAGAGTCTCAAAGCGACCGAGAAAATACTTATGATAGACCACCCTTGTGTTTATTTCTGTATGGGGTCTCAGAGACAAGTGTATTACAAGTATTTAAACAATTAAAGATGGAGTATGTTCTTGAATTTACGGAGAATATTAGTGAAGCAGATGCAATACTTGCACTGCTGTCCAAAATCAAGAAAAATTCTCGGATTCAAGCTGCTGCCCACTCTAATGACACACCTATTTATGTTACTAAGACGAGCTCATTGACACAGTTAACAAAGGCCATAGAGGCGTTAGTGGCTGATTATAATAATGATTTTGAAGATATTGAAGATGAATATTCTCAGATAAATGAATCAGAGAAGGCTGATGCTTTGGAGGAAGCAAGGATTGCCATTGAACAGGTTGTAATCCCAAAAGGAGAACCTGTAGAATTACTTCCTAGACCATCCAACATTATGTTGCTTCAGAAGGATCTCATTCGTAAATATAAACTACAAGCACAGAGAGTTGGTTCAGAGGTGGATGTAAGGCTTCGTATTCTACCATTTCAAGGTGATAAAAAAGATAAAGATTATAATGATGATGGTGATGTTGATGTTGACAATTATGATGATGATGGTCATGATGAATTGTCTGAAACAAATGGCTCGCCCTACCCAATGAATAGATTGCCGCTTCTGCCTGACTAG 1764 39.91 MELGRMLRLLPEEMRRKVNEHEELHQLIEVVMDLGRKPLARFPSGDFVLSDDLITVDDLEHATSLVGDFAVDNRAGISRTLHRISAIRNRKGVIIGLTCRVGRAVSGSAKLLQDLVKDGSSLLLIGPPGVGKTTIIRDIARMLANDYRKRVMIVDTSNEIGGDGDIPHSGIGNARRMQVPDTDMQHKVLIEAVENHMPQVIVIDEIGTKLEAAAASTIAQRGIQLVATAHGITIENLVMNPSLEMLVGGIQSVTLGDEEANRRGVQKSVLERKGPSTFDCAVEIISRLELRVHSNLEATVDAILSGRSPNYQVCKFNQGVENITLQSDPIPYDSFIKKSVTSIEGIPQWIDEKRTPDKHVSKESQSDRENTYDRPPLCLFLYGVSETSVLQVFKQLKMEYVLEFTENISEADAILALLSKIKKNSRIQAAAHSNDTPIYVTKTSSLTQLTKAIEALVADYNNDFEDIEDEYSQINESEKADALEEARIAIEQVVIPKGEPVELLPRPSNIMLLQKDLIRKYKLQAQRVGSEVDVRLRILPFQGDKKDKDYNDDGDVDVDNYDDDGHDELSETNGSPYPMNRLPLLPD 587
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aary5g02754 587 MobiDBLite consensus disorder prediction 546 587 - -
Aary5g02754 587 FunFam uncharacterized protein ycf45 isoform X2 83 300 - -
Aary5g02754 587 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 90 251 IPR027417 -
Aary5g02754 587 SMART AAA-5 118 249 IPR003593 GO:0016887(InterPro)
Aary5g02754 587 CDD AAA 119 208 - -
Aary5g02754 587 Pfam Sporulation stage III, protein AA 94 248 IPR045735 -
Aary5g02754 587 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 528 547 - -
Aary5g02754 587 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 126 145 - -
Aary5g02754 587 PANTHER KINASE-RELATED 2 503 - GO:0009507(PANTHER)
Aary5g02754 587 CDD R3H-AAA 481 540 IPR034081 -
Aary5g02754 587 Gene3D - 99 263 IPR027417 -
Aary5g02754 587 Coils Coil 450 477 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aary5g02754 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
169646 Aary5g02754 Aary13g03267
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aary Aary-Chr16:130930596 Aary5g02754 Aary-Chr5:162007011 dispersed
Aary Aary-Chr3:40700053 Aary5g02754 Aary-Chr5:162007011 dispersed
Aary Aary-Chr13:193441925 Aary5g02754 Aary-Chr5:162007011 wgd