Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aary5g02754 | ATGGAACTAGGAAGAATGTTGAGGTTGTTGCCTGAGGAAATGAGGCGTAAGGTTAATGAACATGAAGAGCTTCATCAATTGATTGAAGTTGTTATGGATTTGGGTCGGAAGCCCTTGGCGCGCTTTCCGTCTGGCGATTTTGTCTTGTCGGATGATTTGATTACTGTTGATGATCTTGAGCATGCCACTTCTTTGGTAGGTGATTTTGCTGTGGATAATCGAGCTGGGATTAGTAGAACTTTGCATCGGATTAGTGCTATTAGGAATCGTAAGGGGGTGATTATTGGGCTAACCTGTCGTGTTGGTCGAGCTGTATCGGGAAGTGCCAAATTATTGCAAGATTTGGTTAAAGATGGATCTTCTTTATTACTTATTGGGCCTCCAGGAGTGGGAAAAACTACAATTATCAGGGATATAGCTCGAATGCTTGCAAATGATTATAGGAAACGTGTCATGATTGTTGACACCTCAAATGAAATAGGTGGAGATGGTGATATACCGCACTCTGGTATAGGTAATGCTAGACGGATGCAAGTTCCTGATACGGATATGCAACATAAGGTGTTGATAGAAGCAGTTGAAAATCATATGCCTCAAGTGATTGTAATTGATGAAATTGGCACAAAACTTGAAGCAGCAGCTGCAAGCACTATTGCACAACGTGGGATTCAGTTAGTTGCAACAGCTCATGGTATTACGATAGAGAATTTAGTGATGAATCCTTCATTGGAGATGCTTGTTGGAGGAATACAGAGTGTGACATTAGGAGATGAAGAGGCGAATCGAAGGGGTGTACAGAAATCAGTGCTCGAGAGAAAAGGCCCATCTACTTTTGATTGTGCTGTGGAGATCATTTCGAGGCTTGAGTTGAGAGTTCATAGCAATCTGGAAGCAACAGTTGATGCTATTCTTTCTGGCCGTTCGCCAAACTACCAAGTTTGCAAGTTTAATCAGGGAGTGGAAAATATTACTTTACAAAGTGATCCAATTCCATATGATTCATTCATCAAGAAGAGTGTCACTTCGATTGAAGGCATTCCACAATGGATTGATGAAAAACGTACACCTGACAAACATGTTTCTAAAGAGTCTCAAAGCGACCGAGAAAATACTTATGATAGACCACCCTTGTGTTTATTTCTGTATGGGGTCTCAGAGACAAGTGTATTACAAGTATTTAAACAATTAAAGATGGAGTATGTTCTTGAATTTACGGAGAATATTAGTGAAGCAGATGCAATACTTGCACTGCTGTCCAAAATCAAGAAAAATTCTCGGATTCAAGCTGCTGCCCACTCTAATGACACACCTATTTATGTTACTAAGACGAGCTCATTGACACAGTTAACAAAGGCCATAGAGGCGTTAGTGGCTGATTATAATAATGATTTTGAAGATATTGAAGATGAATATTCTCAGATAAATGAATCAGAGAAGGCTGATGCTTTGGAGGAAGCAAGGATTGCCATTGAACAGGTTGTAATCCCAAAAGGAGAACCTGTAGAATTACTTCCTAGACCATCCAACATTATGTTGCTTCAGAAGGATCTCATTCGTAAATATAAACTACAAGCACAGAGAGTTGGTTCAGAGGTGGATGTAAGGCTTCGTATTCTACCATTTCAAGGTGATAAAAAAGATAAAGATTATAATGATGATGGTGATGTTGATGTTGACAATTATGATGATGATGGTCATGATGAATTGTCTGAAACAAATGGCTCGCCCTACCCAATGAATAGATTGCCGCTTCTGCCTGACTAG | 1764 | 39.91 | MELGRMLRLLPEEMRRKVNEHEELHQLIEVVMDLGRKPLARFPSGDFVLSDDLITVDDLEHATSLVGDFAVDNRAGISRTLHRISAIRNRKGVIIGLTCRVGRAVSGSAKLLQDLVKDGSSLLLIGPPGVGKTTIIRDIARMLANDYRKRVMIVDTSNEIGGDGDIPHSGIGNARRMQVPDTDMQHKVLIEAVENHMPQVIVIDEIGTKLEAAAASTIAQRGIQLVATAHGITIENLVMNPSLEMLVGGIQSVTLGDEEANRRGVQKSVLERKGPSTFDCAVEIISRLELRVHSNLEATVDAILSGRSPNYQVCKFNQGVENITLQSDPIPYDSFIKKSVTSIEGIPQWIDEKRTPDKHVSKESQSDRENTYDRPPLCLFLYGVSETSVLQVFKQLKMEYVLEFTENISEADAILALLSKIKKNSRIQAAAHSNDTPIYVTKTSSLTQLTKAIEALVADYNNDFEDIEDEYSQINESEKADALEEARIAIEQVVIPKGEPVELLPRPSNIMLLQKDLIRKYKLQAQRVGSEVDVRLRILPFQGDKKDKDYNDDGDVDVDNYDDDGHDELSETNGSPYPMNRLPLLPD | 587 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aary5g02754 | 587 | MobiDBLite | consensus disorder prediction | 546 | 587 | - | - | |
| Aary5g02754 | 587 | FunFam | uncharacterized protein ycf45 isoform X2 | 83 | 300 | - | - | |
| Aary5g02754 | 587 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 90 | 251 | IPR027417 | - | |
| Aary5g02754 | 587 | SMART | AAA-5 | 118 | 249 | IPR003593 | GO:0016887(InterPro) | |
| Aary5g02754 | 587 | CDD | AAA | 119 | 208 | - | - | |
| Aary5g02754 | 587 | Pfam | Sporulation stage III, protein AA | 94 | 248 | IPR045735 | - | |
| Aary5g02754 | 587 | PRINTS | Endopeptidase La (Lon) serine protease (S16) signature | 528 | 547 | - | - | |
| Aary5g02754 | 587 | PRINTS | Endopeptidase La (Lon) serine protease (S16) signature | 126 | 145 | - | - | |
| Aary5g02754 | 587 | PANTHER | KINASE-RELATED | 2 | 503 | - | GO:0009507(PANTHER) | |
| Aary5g02754 | 587 | CDD | R3H-AAA | 481 | 540 | IPR034081 | - | |
| Aary5g02754 | 587 | Gene3D | - | 99 | 263 | IPR027417 | - | |
| Aary5g02754 | 587 | Coils | Coil | 450 | 477 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aary5g02754 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 169646 | Aary5g02754 | Aary13g03267 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Aary | Aary-Chr16:130930596 | Aary5g02754 | Aary-Chr5:162007011 | dispersed | |
| Aary | Aary-Chr3:40700053 | Aary5g02754 | Aary-Chr5:162007011 | dispersed | |
| Aary | Aary-Chr13:193441925 | Aary5g02754 | Aary-Chr5:162007011 | wgd |