Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aary5g02771 | ATGACGGAAATGCAACATTCCGTAATTTATTTGTTACTTTTAACCATTTTTTTCTTTCAGTTTCAAGCTCAAGCTCAAGCTGCTGCTCCGGTGATTAAGCAGTTATCTTCTATAATAAAGTGGACAGCTAGTAGGTCTTCTTCTAAATCTACTGTTTCAGATGGGAATATTCTTCAGTTTGAGGACGGGTATTTAGTAGAAACTGTTGTTGAAGGGAATCAGCTAGGGGTCGTGCCATATTCTATTCGAGTGTCACAGGAAGGTGAACTATATGCCGTCGATTCAGTCAATAGCAACATTGTTCGAATCACACCGCCTTTGTCTCAATATAGTAGGGCAAGATTGATTGCCGGGTCATTCCAAGGTTATACTGGACATGTAGATGGAAAACCAAATGATGCCCGTTTTGATCATCCTAAAGGGGTTACTATGGATGATAAAGGAAATGTTTACGTTGCTGATACCTCTAATCTTGCCATCAGAAAGATTGGTGAAACAGGTGTGACTACAATTGCTGGAGGAAAATCAAATGTAGCAGGGTACAGGGACGGCCCAAGTGAGGATGCACAGTTCTCAACTGATTTTGATGTAATTTATGTGAGGCCAACATGTTCGTTGCTTGTTATTGACCGGGGAAATGCTGCTCTTCGGCAAATTGCTCTCAATCAAGAGGATTGTGATTTCCACGATACCTCTGTCTCGTCCACAGATCTCATTCTGGTAGTCAGTGCCATATTGATAGGATACGTTTTTTGCAAACTTCAACAAGGATACGGTTCATCATATTTCGCAAAAGATAAGGTGGAGAGTGACACTAAACAACCAATCAAGGAAAACTCTCTTAAAACTCATACTGTGGAAACTGTTAAAGAGGAACAAGAAGCAGGATGGCCATCTTTCGGGCAGCTTGTTATGGATCTCTCAAAGCTTGCTATTGAAGGCTTTGGTAACATGTTCGTTTCTTTTAACCCCTTTAACATAGGTCCTAAAAGAGGCCTCACTCCATTAAAAGATCATCTCATAATGCCTGAAGATGAGCCTGCTAACCAGCCTCCATTAGTTAAAAAACACAGGACTCCAACTCCTCTCTCAGAAACCCGTCATGCCCACAACCCAAACGAAAATTACCCTGAAACAAAGCCTGCTAAGGTCAGATCATCTTCAAAAGATCCAAGCAAACATCGGGTCTCAAAACAAGAAGAATATGCAGAGTTTTACGGAGCTAGTGGCGAGGTCCCTCATGTTCGGTCAAAAAGCCAGAAGGAAAGAACCAAGCATCGGCCTAGGGATAAACGAGCTGAAGTTGTGTATGGAGAGCAAAAACCAGTTGACCCAAAACCGGTCAACTATGAGGATTCTAAGTTTAGTTATATGAGAAACAAGTATGGTGATTCGTATCGCTAA | 1404 | 41.6 | MTEMQHSVIYLLLLTIFFFQFQAQAQAAAPVIKQLSSIIKWTASRSSSKSTVSDGNILQFEDGYLVETVVEGNQLGVVPYSIRVSQEGELYAVDSVNSNIVRITPPLSQYSRARLIAGSFQGYTGHVDGKPNDARFDHPKGVTMDDKGNVYVADTSNLAIRKIGETGVTTIAGGKSNVAGYRDGPSEDAQFSTDFDVIYVRPTCSLLVIDRGNAALRQIALNQEDCDFHDTSVSSTDLILVVSAILIGYVFCKLQQGYGSSYFAKDKVESDTKQPIKENSLKTHTVETVKEEQEAGWPSFGQLVMDLSKLAIEGFGNMFVSFNPFNIGPKRGLTPLKDHLIMPEDEPANQPPLVKKHRTPTPLSETRHAHNPNENYPETKPAKVRSSSKDPSKHRVSKQEEYAEFYGASGEVPHVRSKSQKERTKHRPRDKRAEVVYGEQKPVDPKPVNYEDSKFSYMRNKYGDSYR | 467 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aary5g02771 | 467 | Gene3D | - | 15 | 221 | IPR011042 | - | |
| Aary5g02771 | 467 | MobiDBLite | consensus disorder prediction | 383 | 401 | - | - | |
| Aary5g02771 | 467 | PANTHER | - | 18 | 463 | - | - | |
| Aary5g02771 | 467 | MobiDBLite | consensus disorder prediction | 342 | 467 | - | - | |
| Aary5g02771 | 467 | SUPERFAMILY | NHL repeat | 76 | 185 | - | - | |
| Aary5g02771 | 467 | Pfam | NHL repeat | 136 | 162 | IPR001258 | GO:0005515(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aary5g02771 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Aary | Aary-Chr3:81672228 | Aary5g02771 | Aary-Chr5:164355499 | dispersed | |
| Aary | Aary-Chr5:164355499 | Aary17g01145 | Aary-Chr17:92095881 | transposed |