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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aary5g02774 ATGATTTGTCTAATACCCAACGCAACTCGTAATACTTGGTCCAAACTTAAAACTAGTAATGCTACCAATGCGTCTTATATCGCGGCTTCGTATGTTAAGTTTGTGGAGTCTGCTGGTGCTAGAGTTGTTCCGATTATTTTTAATGATCCAATGGAGGATATACAAAGAAAACTCAATCTAGTCAACGGAGTGCTTTTTACAGGTGGATGGTCTAAGACTGGCCTCTACTTTGATGTCATTGAGGAAGTTTTTAATCAAGTCCTGAAGAAGAATGACGCTGGTGAACATTTCCCGTTGCTTGCTATATGCTTAGGTTTTGAACTTGTAACAATGATTGTTAGCAAAAACAATAACATCCTTGAAGCCTTTAGTGCATCAGATCAAGCATCCACACTGCAATTCATGAACAACATTAATATTGAAGAAACTGTGTTTCAAAGATTTCCTCCTGAGTTGGTTGCCAAGTTGAGTACAGAATGCCTTGTGATGCAAAACCATAAATACGGAATATCGCCTGAAACATTTCAAAAGACCAAGGAACTATGCAGTTTCTTTAAGGTCATAACAACTAGTACCGACGAAAATAACAAGGTATATGTATCAACAGCTCAATCCGAGAGGTATCCCGTGACTGCTGTCCAGTGGCATCCAGAGAAAAATGCTTTTGAGTGGGGCTCGTCGGTGATTCCACATTCAGATAATGCAATTCAAGTGACTCAACATGTTGCAAACTATTTCGTAAGCGAGGCTAGAAAATCCTTCAACAGACCACCTAATGACGAAGTGCTAAAAAACCTTATTTACAATTACAGCCCCACTTATTGTGGGACGGCTGGGAAAGGATACGATGAGGTTTACATCTTCACTGAGAATGAAAAGATGGCTCGACTTTAA 894 39.6 MICLIPNATRNTWSKLKTSNATNASYIAASYVKFVESAGARVVPIIFNDPMEDIQRKLNLVNGVLFTGGWSKTGLYFDVIEEVFNQVLKKNDAGEHFPLLAICLGFELVTMIVSKNNNILEAFSASDQASTLQFMNNINIEETVFQRFPPELVAKLSTECLVMQNHKYGISPETFQKTKELCSFFKVITTSTDENNKVYVSTAQSERYPVTAVQWHPEKNAFEWGSSVIPHSDNAIQVTQHVANYFVSEARKSFNRPPNDEVLKNLIYNYSPTYCGTAGKGYDEVYIFTENEKMARL 297
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aary5g02774 297 SUPERFAMILY Class I glutamine amidotransferase-like 24 288 IPR029062 -
Aary5g02774 297 PANTHER PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE 16 289 IPR015527 GO:0005773(PANTHER)|GO:0008242(InterPro)|GO:0034722(PANTHER)|GO:0046900(PANTHER)
Aary5g02774 297 ProSiteProfiles Gamma-glutamyl hydrolase domain profile. 1 289 IPR015527 GO:0008242(InterPro)
Aary5g02774 297 Gene3D - 8 289 IPR029062 -
Aary5g02774 297 FunFam Folate gamma-glutamyl hydrolase 1 289 - -
Aary5g02774 297 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 17 256 - -
Aary5g02774 297 Pfam Peptidase C26 15 218 IPR011697 GO:0016787(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aary5g02774 K01307 gamma-glutamyl hydrolase [EC:3.4.19.9]
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Event-related genes

Select Gene_1 Gene_2 Event_name
7092 Aary15g02602 Aary5g02774
9845 Aary5g02774 Aary7g02583
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aary Aary-Chr15:199691934 Aary5g02774 Aary-Chr5:164369754 wgd
Aary Aary-Chr5:164369754 Aary7g02901 Aary-Chr7:229623319 wgd
Aary Aary-Chr5:164369754 Aary7g02583 Aary-Chr7:217330573 wgd