Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aary5g02815 | ATGTCTTTTACACTAGTCCCTTTAACGTCCACATTCACTTCATTTCCATCTAAACAATTAGCCACATCCACCAACTCACAATTCATCTCCAAGGCTCGAACCAACCAAACCCATGGTTTCAAAGTCTCATGCAACGCTTCACCCGAAGACAATGAGAACCATCTCATACTACCCGAAACACAAAAGCTTATACTACCCAATAATGTAGACCGAAGGAACCTCCTCGTGGGGCTTGGCGGTCTGTATACGGCAGCAAGCCTTACTTCACTCCCGTCAGCCTTTGCTAGTCCCATTACGGCTCCTGATATCTCGTCCGTATGCCAGGACGCAAAAACAGGTTTTGAGGCGTCGAAGGACGATAAGGAGGCTGTACGGACGGGGAAATGCTGCCCTCCGAGCCTCGGCAAGCCGATTCAACCGTTTGTGTTTCCAAGTAAAGAAAAGACCAGGGTGCGATGGCCGGCTCATAAAGGGACGGATAAGCAAGTGAAGAGCTACAAGAAAGCCATTAAAGCCATTCTGGATCTCCCAGATGACCACCCGCACAGCTTCGCAAGCCAAGCTAAGATTCATTGTGCTTATTGTAACGGTGGTTATACTCAAGTCGATAGCGGTTTCCCAGATATCGAAATTCAGATTCATAACTCGTGGCTATTCTTTCCATTCCATCGTTGGTACCTTTATTTCTATGAAAGAATTCTCAGAAAGTACAGTGGGGATGACGATTTCGCGTTACCTTACTGGAACTGGGACAATCCAGATGGAATGACAATTCCTCAAATGTTTGTAGAAGCAAAAGATGATGGCGGAAACGAAAATCCTCTCTATGACATAAACCGGGACGTGCGTCATCTCCCACCAAAAGTAGTAGATCTGTTCTTTAGTGGAGCCAAGATAGCAAATAATTTTGCGAATGAACTAGACAGTGAAACACAGAAAGCCTGCAATCTTAGTATGGTGTACAAAGATTTGATCAGAAACGCAACTGATTGGAAAAGCTTCTTCGGAGGAGAATACACGGCTGGGCCGCAGACTGATACGGCGTCAGTCGGGTCTGTGGAAAGCAACACTCACACTGCTGTACACGTATGGGTTGGTAACCCAGATAACCTTAATAGAGAGGACATGGGCAACTTCTACTCTGCGGGATATGATCCTTTGTTTTACGTTCACCATGCAAACGTCGACCGTATGTGGAAACTGTGGAAGGATTTGGGAATTCCTGGACATTCAGAACCAACCGCGGATGACTGGCTAAATGCATCATATGTGTTCTATGACGAGAATGAGAATCTTGTACGTGTAAACAACAAAGACTCTGTCAACATAGATAAGCTCAAATATGATTTTGAAGAGTCAAGGACACCTTGGAAGGGCAGTCGACCTCCCCAACGTAAGGAGAAGTCCAAAGAATTATCGAAGGCACTTATTGGAGAGACGAAAACGGTGGAGGAAGCCTTTAAGAAACCAGCGCGTCTGGACCCACTTCTCAAGGTTCGTGTGAAGAGGCCAACTAAGAACAGAAGTCCCGAGGATAAGGCCAAGGCGAATGAGATTTTGTGTATAAACGGGATACAATTCAACAGCAACAAGTTTGTGAAATTCGACGTGTTTGTGAATGATAAAGTGGACACAAACGGGACGCTGCCAACAGCTTGTGATCCTGAGTTTGCTGGTTCTTTTGCACAGGTTCCACACAGTGGCAACGAACAAGGTGGAATGTTGATGTCAAGTGCAGCGAGGTTCGGTTTGAATGATCTTTTGGACGACACAAAAACTGAAGACGAAGAGTATGCGTTGGTGGCTTTGGTGGCAAGGGCAGGTTGCGAAGATCTCACTGTCTCAGGGATCGAGATCAAGTTGGTTCCTATTGGTTCCACTTAG | 1884 | 45.97 | MSFTLVPLTSTFTSFPSKQLATSTNSQFISKARTNQTHGFKVSCNASPEDNENHLILPETQKLILPNNVDRRNLLVGLGGLYTAASLTSLPSAFASPITAPDISSVCQDAKTGFEASKDDKEAVRTGKCCPPSLGKPIQPFVFPSKEKTRVRWPAHKGTDKQVKSYKKAIKAILDLPDDHPHSFASQAKIHCAYCNGGYTQVDSGFPDIEIQIHNSWLFFPFHRWYLYFYERILRKYSGDDDFALPYWNWDNPDGMTIPQMFVEAKDDGGNENPLYDINRDVRHLPPKVVDLFFSGAKIANNFANELDSETQKACNLSMVYKDLIRNATDWKSFFGGEYTAGPQTDTASVGSVESNTHTAVHVWVGNPDNLNREDMGNFYSAGYDPLFYVHHANVDRMWKLWKDLGIPGHSEPTADDWLNASYVFYDENENLVRVNNKDSVNIDKLKYDFEESRTPWKGSRPPQRKEKSKELSKALIGETKTVEEAFKKPARLDPLLKVRVKRPTKNRSPEDKAKANEILCINGIQFNSNKFVKFDVFVNDKVDTNGTLPTACDPEFAGSFAQVPHSGNEQGGMLMSSAARFGLNDLLDDTKTEDEEYALVALVARAGCEDLTVSGIEIKLVPIGST | 627 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aary5g02815 | 627 | SUPERFAMILY | Di-copper centre-containing domain | 128 | 457 | IPR008922 | - | |
| Aary5g02815 | 627 | ProSitePatterns | Tyrosinase CuA-binding region signature. | 214 | 231 | IPR002227 | GO:0016491(InterPro) | |
| Aary5g02815 | 627 | Pfam | Common central domain of tyrosinase | 182 | 404 | IPR002227 | GO:0016491(InterPro) | |
| Aary5g02815 | 627 | PIRSF | PPO-plant | 1 | 623 | IPR016213 | GO:0004097(InterPro)|GO:0046148(InterPro) | |
| Aary5g02815 | 627 | Pfam | Protein of unknown function (DUF-B2219) | 490 | 621 | IPR022740 | GO:0004097(InterPro) | |
| Aary5g02815 | 627 | Pfam | Polyphenol oxidase middle domain | 414 | 462 | IPR022739 | GO:0004097(InterPro) | |
| Aary5g02815 | 627 | ProSitePatterns | Tyrosinase and hemocyanins CuB-binding region signature. | 385 | 396 | IPR002227 | GO:0016491(InterPro) | |
| Aary5g02815 | 627 | PRINTS | Tyrosinase copper-binding domain signature | 245 | 250 | IPR002227 | GO:0016491(InterPro) | |
| Aary5g02815 | 627 | PRINTS | Tyrosinase copper-binding domain signature | 214 | 231 | IPR002227 | GO:0016491(InterPro) | |
| Aary5g02815 | 627 | PRINTS | Tyrosinase copper-binding domain signature | 357 | 368 | IPR002227 | GO:0016491(InterPro) | |
| Aary5g02815 | 627 | PRINTS | Tyrosinase copper-binding domain signature | 384 | 402 | IPR002227 | GO:0016491(InterPro) | |
| Aary5g02815 | 627 | PANTHER | TYROSINASE FAMILY MEMBER | 69 | 585 | IPR050316 | - | |
| Aary5g02815 | 627 | Gene3D | - | 96 | 455 | IPR008922 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aary5g02815 | K00422 | polyphenol oxidase [EC:1.10.3.1] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 4534 | Aary10g05208 | Aary5g02815 | |
| 9252 | Aary2g01723 | Aary5g02815 | |
| 9853 | Aary5g02815 | Aary7g02547 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Aary | Aary-Chr13:195525849 | Aary5g02815 | Aary-Chr5:168414233 | dispersed | |
| Aary | Aary-Chr5:168151198 | Aary5g02815 | Aary-Chr5:168414233 | dispersed | |
| Aary | Aary-Chr5:168414233 | Aary9g00971 | Aary-Chr9:89883972 | dispersed | |
| Aary | Aary-Chr5:168271977 | Aary5g02815 | Aary-Chr5:168414233 | tandem |