AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aary5g02851 ATGTCATCCGAACCTCCAATTGACAACAACAACAACAACTCAAACACCAAATCCGAACAAGAAACAACCACACTCGCCTTCCACAAGAAACGAGCTCGTCGCGTCAGCTTCGCCGAAAACACATCCGTACACATCTTCAACCGCGACGAAGACTCCGGTACTCCCGTGAACGCGAAACAACCGCCGTCTCATGAGAATGAGTATTCTGATGAACCTAAGTTTTGGAATGATAATGATACTGGGAATGATGAGGATCAAGCTAACTACCTTCTTTCCAATAAATTTCTGCTTGCAGAAGATAATTTTTTTGGTCCTGTATCGGCAAACTTCATTAGACGAGATATACTGGACCGTGAAGCTTCTGACGGAAATCATGATCAGACTATGGATTCAACAGCCTTTTCGATGCATTTTCGTAGCATTGCTAGGGTTCACCTTTCCTTTGAGGAGAAAACCCTAAATCAAGATTCTAATCCCACACATACAGGAAGCTTAATGCTTATGACACAAGCTAAGAAGCCAAATCATCAACCTTCGGTTTCTACCTCCAAACTACGCACTTCATCCGAGTCTAATGATATGAAACTATCTCCTACATTGGATGCACTCTTGGCTGAAGGCAATAAGGATTTGCGTGTGATCGCTGCTTCTAAAGATACTATTCTGAAATCACCAAGAATGGTTGCAACAACCAAAGAGTATGGGGCTAATCTCATGGATTTTATTTGTGTATCTTGTCAAAGATGCAGTTCAGAGAAAGTCAAGCTTGGACTTCATGCTACCAGTCAAAGCAATACTAATCAACATCAACCACCTTTTGTAGGGGAAGTGAACTCTTTGAATGATAAGTCTAGTCACATGCATTTCGATGGTGTCAGTCCATCTAAATTACCATCTGCTGCGACTCCTCTTCATAATTATTCAAGTGTTTTTTTTTTAATCCATGCAGAAAAGCATTCTAAACTCAAAATGCTGAACGCTTCTCCCTTTTCTGCTGATCTGACTGCTAAACTTGAAGATTCAGCTTCCCGATCTGTACACAGTCCCTCTAAGATGACTCCTAATACTTCGTTGGAGAAAAACCATAATGCTTCTTTACTCAATTATATGATGATAAGAGAAAGAGCAAGTTCAACAACTATGGATGATGTTAGGTTGCAGACACCAAAGAATGCTGTCCCTGTAACTCATATGCAAAATGTTGCCAAACTTGCATCACCTTTATTGATACCACCTGAAAGCGCATTGTCTGGAGAAAAGTTGCAGGCAGAATTCTTGTCATCGGCAGATATCCGAAATGGTTATGAATATGATAAAGACAAATTTAATTTACCTCAAAATGCAATGCAATTTGCCAAACACAATGAACAGGGGGAAAGCGTTACTAATCCAAGTCTTTCTGCTATTGCTGCTGACAAGACCGATGCCTTGTGCATTGAGACGTTAGAAATAGATAGTTCGGAAATGTCCACTGAAGAAGAAATGGTGGATGTCAGAGAGGTTTCTCTCAATGAGGCCCGTGGTAACTTAGAAACAAAGGAGAACGCTACAACTGTATTGAAGGATGATCAACATTTGCAGATTCAACCTAAGTTTATGGAAAGTGATATTGCTAGCGGAGAGTCTAGACGAGCTTCCCTGGTTTTGGAAGAACAGTCAGATAAACAATCTTGTCAGAAGAATTTGCATGGTGAGTTTTGTCAAAGCCCCTCAAATAAACAGCCATATGATGCGGACGTTGATTTCATACCGGCGGAAAATGTACCGTCGCCAAGTCCTCATCGCTTATTGAATGGAGATATAATCTCTGAGCAGGGAAGAAAGACTATATTCGGTGTGGTTGAGAGAACTGCTAGAACTCAGAGGAGTCCAAATATCACAAAAAGTCATGTTGGCACCAAAGTCTCAAGTGACAATGAAATATCAACGCTTGTACACACTTTTATAAATCCAACTGAGATGACTGCTATGCTCTTTAGAGAAACAAAAGAACTTATACCTCAATCAGCTGATAAGTTCAACTTGCATGCGATTGATTGTCTGACAAGCATCATAGATCAGCTTCTGAAGGCAAAAACATATCAGCTTCTTTCTGACGAAATCAAATCTCAGTTGCGGCTACTGAATGTGAAGCGGGAGAGGTTACTGGGTAGAATCAGTTTCCCCGGTATATTGGAGTCCGAGGAATTAAGGTTGATTTTTCCACCACAACAATCTTCACTTGTCCATTGCAAGTCCTTGTCAGTCAACATGAACAACCATCATGAGAGCCAGATTGACAGTGACAAAGTGACATCAATGGAGCAAACAGTTGATCATATCGATAGAAGAATTGCAAACTTGACCAAATCATTTCACAAGTCATGTAAGATGAAGGGAGAACCCAGCGCCCATGACAGTATTGCATTTGTTAATGATTATGTGAAGAAGCGAGCATGCTGCCAGATCATACGAAAGGATCTACAGCTTTGGACTGTAGACAATTTTGAGGTGGGAAATGGTTGCCACAATGTTAATCTCAATTACCTGGATCTGATAACTCAAAGGTTAACAGTCAAAACTGGTCCTGTCCCAAGCATTTCTGTTTCACACGAGTTACATAAAGCGAACATCAGCAAGTTTCTTGGTCAAATACTTGCATCATCTACATTTTTGTCTTGTAGATCTTCAATGACATGGATGCTTGTGCTGCATTTGAATTTGTCTTTTTCTGCTGGAATGATGCAGAAGCATGCCGATGCTACAAGCTTAGCTCAAGCAACTCAAGTGACTGGTTCTCGTTTGGGCAGTTTGTTAGATGTGTTGGAAGAGATACAACATGCAAGAATAGAGCCAAAAAACTTGATTTCTGCAAGATTTCACACACCCAAAGCTGAGCAACTTGACCTTGAACTCTCCTTTTTTGATTCAACACATCGTAGGAAGGCAGCAGTTACATTAGACGCATCATGTTTGGCAAGGGGCATCTATCCTTCAGAAATTGTACCGTATCAGGTTGACATTCCTATTGATGAGCAACAAAGCTCTTCTCCATCACTTTCAGCTGAGATTGCATCAGCATTTCAAGATCTTAAAGTGGGATATATTAAGGATTCAACGGTTGTGTACATGCATTTCCATGTTAATCGGCCCTCCAAGCAGGTAAATATCATGAACAATAGCTTAAGAAGGAACAAACACATGGAAATTAGAAATATCTACAAGTCACACTCAGTTCCATGTTAG 3225 40.56 MSSEPPIDNNNNNSNTKSEQETTTLAFHKKRARRVSFAENTSVHIFNRDEDSGTPVNAKQPPSHENEYSDEPKFWNDNDTGNDEDQANYLLSNKFLLAEDNFFGPVSANFIRRDILDREASDGNHDQTMDSTAFSMHFRSIARVHLSFEEKTLNQDSNPTHTGSLMLMTQAKKPNHQPSVSTSKLRTSSESNDMKLSPTLDALLAEGNKDLRVIAASKDTILKSPRMVATTKEYGANLMDFICVSCQRCSSEKVKLGLHATSQSNTNQHQPPFVGEVNSLNDKSSHMHFDGVSPSKLPSAATPLHNYSSVFFLIHAEKHSKLKMLNASPFSADLTAKLEDSASRSVHSPSKMTPNTSLEKNHNASLLNYMMIRERASSTTMDDVRLQTPKNAVPVTHMQNVAKLASPLLIPPESALSGEKLQAEFLSSADIRNGYEYDKDKFNLPQNAMQFAKHNEQGESVTNPSLSAIAADKTDALCIETLEIDSSEMSTEEEMVDVREVSLNEARGNLETKENATTVLKDDQHLQIQPKFMESDIASGESRRASLVLEEQSDKQSCQKNLHGEFCQSPSNKQPYDADVDFIPAENVPSPSPHRLLNGDIISEQGRKTIFGVVERTARTQRSPNITKSHVGTKVSSDNEISTLVHTFINPTEMTAMLFRETKELIPQSADKFNLHAIDCLTSIIDQLLKAKTYQLLSDEIKSQLRLLNVKRERLLGRISFPGILESEELRLIFPPQQSSLVHCKSLSVNMNNHHESQIDSDKVTSMEQTVDHIDRRIANLTKSFHKSCKMKGEPSAHDSIAFVNDYVKKRACCQIIRKDLQLWTVDNFEVGNGCHNVNLNYLDLITQRLTVKTGPVPSISVSHELHKANISKFLGQILASSTFLSCRSSMTWMLVLHLNLSFSAGMMQKHADATSLAQATQVTGSRLGSLLDVLEEIQHARIEPKNLISARFHTPKAEQLDLELSFFDSTHRRKAAVTLDASCLARGIYPSEIVPYQVDIPIDEQQSSSPSLSAEIASAFQDLKVGYIKDSTVVYMHFHVNRPSKQVNIMNNSLRRNKHMEIRNIYKSHSVPC 1074
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aary5g02851 1074 MobiDBLite consensus disorder prediction 23 37 - -
Aary5g02851 1074 MobiDBLite consensus disorder prediction 1 22 - -
Aary5g02851 1074 Pfam Knl1 RWD C-terminal domain 767 934 IPR040850 -
Aary5g02851 1074 MobiDBLite consensus disorder prediction 1 82 - -
Aary5g02851 1074 MobiDBLite consensus disorder prediction 64 80 - -
Aary5g02851 1074 PANTHER OS06G0608100 PROTEIN 258 716 - -
Aary5g02851 1074 MobiDBLite consensus disorder prediction 170 193 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aary5g02851 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
7069 Aary15g02519 Aary5g02851
7074 Aary15g02550 Aary5g02851
9860 Aary5g02851 Aary7g02524
168178 Aary5g02851 Aary13g03324
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aary Aary-Chr13:199917734 Aary5g02851 Aary-Chr5:173209221 dispersed
Aary Aary-Chr15:197366425 Aary5g02851 Aary-Chr5:173209221 wgd
Aary Aary-Chr5:173209221 Aary7g02524 Aary-Chr7:214528441 wgd