AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aary5g02856 | ATGGCAAAGCAAAAGATTGTTGTTAGAGTTACAATGAACACCGACAAGAAATCTCGTAAGGCTTTGGGGATCGCTGTTAGTCTTAATGGAGTTGAATCAGCATCTTTCGTCGGATCAGACCAGATAGCAGTGACAGGGGAAGGTATCGACTCGGTCAAACTAGCAACTTTACTAAGGAAAGGTGTAGGATACACGGAGCTAGTGACTGTTGGTAACGTGGAGGAGAAGAAACCCGAGGCGAAGGAATCGAAGCCAGCCGAGGTGACATGGCAAATTAATCCTTACGAATACTACTATAATAACTACGGCATGCCATATTATTATGTTTATTAG | 333 | 43.24 | MAKQKIVVRVTMNTDKKSRKALGIAVSLNGVESASFVGSDQIAVTGEGIDSVKLATLLRKGVGYTELVTVGNVEEKKPEAKESKPAEVTWQINPYEYYYNNYGMPYYYVY | 110 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aary5g02856 | 110 | PANTHER | OS04G0464100 PROTEIN | 4 | 88 | IPR044296 | - | |
| Aary5g02856 | 110 | Gene3D | - | 1 | 76 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aary5g02856 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Aary | Aary-Chr13:198960265 | Aary5g02856 | Aary-Chr5:173659551 | dispersed | |
| Aary | Aary-Chr13:199036389 | Aary5g02856 | Aary-Chr5:173659551 | dispersed | |
| Aary | Aary-Chr15:36431746 | Aary5g02856 | Aary-Chr5:173659551 | dispersed | |
| Aary | Aary-Chr5:173659551 | Aary7g00791 | Aary-Chr7:38844808 | dispersed | |
| Aary | Aary-Chr5:173653430 | Aary5g02856 | Aary-Chr5:173659551 | tandem | |
| Aary | Aary-Chr5:173659551 | Aary5g02857 | Aary-Chr5:173804051 | tandem |