Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aary5g02858 | ATGCTTCTATCACCAGGCCACTCTCCACGGCGTTTATCATCTCCGTCACCGTCACCGTCACAAACACCGTCACTTAACGCCGTTAATTCAAACCCTCAAAACCCTAGAAAACGAAACTCGTCATCGTCAACGGTGCTTGATGAAGACACATATGTAGCAGCAATTGAGAAAATAATCGAACGTGATTACTTTCCTGACATTCCTAAGCTTCGTGACCGGTTAGATTTGCTCGAAGCGTCTCGTACGGGCGATCCGATGCTTATTCGCGACGCGCAGCTGAAGATTATCGAGCGGCGGTCCGGGAAAACTGCGGGTAATGATACGGCAGGTAAATTTCGCACGCCTGGGTCCACTTTTTTTAGAAATAGTGTCTCCTTAGGGTTTGATCAAACACCTGTTGAAAACGTAAATGTCGATAATGAGAAGAGTTCAGTTGATGAGAATGCTGATAGTATGGATGAGTTAACGTTAGACGCGTTTTTTAGACGGTATACGAGTGAGGATAACGAGAGTTTTAGTAAACTGATTGAGAAGGTTAATAAGAGGAAGAGGGAGAGGTATGGGTTTTTGTTGGATGGGGAGAATCGTGGGACGGGTGGTTTGATTGAGGATGTGAAGAAGGATAGGATTACGGATGGGTATGGGACGTCGGATCAGCCTTTGGCGACTTTGGAGAGCTGGAAGTATACCGCCAAGAATTTGTTGATGTATCATCCGGCAGATAGAGGTGAAGTGGCGTTGACGAATGATGAGTTGGCGAATAGGATTAATGGGATGACTAAGGAGATTAGTAAGACGAATACAAGGTTTCATGGGAAGGTGAGTGATTATAGGGGTAGAGCGGATGATGAGGTTTCGGTGCTTTATAATCCGGTTGCTGGTGGGACTCCTGTTCCTTGGTCTTTGTCGGATAGGGATGGGGATAAGATGAAGAAGTATGATTTGGAGGAAATGAAGAAGACGCCTAATCCGTTTTATGTTGAGTCGAATAAGAAAGCGGATAATGGATATAGTTTTGTGAAGACGCCGTCACCTGCACCAGGTGTGGATGAGTCGCCGTTTATTACGTGGGGTGAGATTGAAGGGACGCCATTGAGATTGGAAGATGAAGATACTCCTATTGATATTGGTGGCAGTGGAAATGGGCCTCATTTTAATATCCCTCTTCCACCTTCACGGGATTTAAAGGCTCATTCTTTGTCAAGAGACGCTTCTCGGAAACTGAGGGATCGATCGCTGATGTTTCAGAAACCGCCATTGCATTCCCCAGCTAGAAGTGGTAGTGCTAGTCCTAGTGCGCGGACACTTTCACCTGCTGCACAGAAGTTTGTTAGAAATGCTATTGCCAAGTCTTCTCGTTCGGCTACTGTTGATGAATCGCTTCGTGCAAGTTATCGTGGGTCAAGTCCTGGATTAGCTACACCAAAATCTGGAAGAAGTACATCGAGGTTGGGAAGAGATGGTAGCGTGAGTTTGAGGTCACCGTCTGTAGGGGAGGGCTCTAATCGTCCTTGGTAA | 1518 | 46.18 | MLLSPGHSPRRLSSPSPSPSQTPSLNAVNSNPQNPRKRNSSSSTVLDEDTYVAAIEKIIERDYFPDIPKLRDRLDLLEASRTGDPMLIRDAQLKIIERRSGKTAGNDTAGKFRTPGSTFFRNSVSLGFDQTPVENVNVDNEKSSVDENADSMDELTLDAFFRRYTSEDNESFSKLIEKVNKRKRERYGFLLDGENRGTGGLIEDVKKDRITDGYGTSDQPLATLESWKYTAKNLLMYHPADRGEVALTNDELANRINGMTKEISKTNTRFHGKVSDYRGRADDEVSVLYNPVAGGTPVPWSLSDRDGDKMKKYDLEEMKKTPNPFYVESNKKADNGYSFVKTPSPAPGVDESPFITWGEIEGTPLRLEDEDTPIDIGGSGNGPHFNIPLPPSRDLKAHSLSRDASRKLRDRSLMFQKPPLHSPARSGSASPSARTLSPAAQKFVRNAIAKSSRSATVDESLRASYRGSSPGLATPKSGRSTSRLGRDGSVSLRSPSVGEGSNRPW | 505 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aary5g02858 | 505 | MobiDBLite | consensus disorder prediction | 447 | 463 | - | - | |
| Aary5g02858 | 505 | MobiDBLite | consensus disorder prediction | 470 | 505 | - | - | |
| Aary5g02858 | 505 | MobiDBLite | consensus disorder prediction | 9 | 45 | - | - | |
| Aary5g02858 | 505 | MobiDBLite | consensus disorder prediction | 396 | 414 | - | - | |
| Aary5g02858 | 505 | MobiDBLite | consensus disorder prediction | 423 | 439 | - | - | |
| Aary5g02858 | 505 | Coils | Coil | 249 | 269 | - | - | |
| Aary5g02858 | 505 | PANTHER | ES-2 PROTEIN - RELATED | 20 | 495 | IPR019148 | GO:0071013(PANTHER) | |
| Aary5g02858 | 505 | MobiDBLite | consensus disorder prediction | 1 | 45 | - | - | |
| Aary5g02858 | 505 | Pfam | Nuclear protein Es2 | 43 | 443 | IPR019148 | - | |
| Aary5g02858 | 505 | MobiDBLite | consensus disorder prediction | 375 | 505 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aary5g02858 | K13118 | protein DGCR14 |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 168180 | Aary5g02858 | Aary13g03388 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Aary | Aary-Chr13:202809084 | Aary5g02858 | Aary-Chr5:174068862 | wgd |