AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aary5g02858 ATGCTTCTATCACCAGGCCACTCTCCACGGCGTTTATCATCTCCGTCACCGTCACCGTCACAAACACCGTCACTTAACGCCGTTAATTCAAACCCTCAAAACCCTAGAAAACGAAACTCGTCATCGTCAACGGTGCTTGATGAAGACACATATGTAGCAGCAATTGAGAAAATAATCGAACGTGATTACTTTCCTGACATTCCTAAGCTTCGTGACCGGTTAGATTTGCTCGAAGCGTCTCGTACGGGCGATCCGATGCTTATTCGCGACGCGCAGCTGAAGATTATCGAGCGGCGGTCCGGGAAAACTGCGGGTAATGATACGGCAGGTAAATTTCGCACGCCTGGGTCCACTTTTTTTAGAAATAGTGTCTCCTTAGGGTTTGATCAAACACCTGTTGAAAACGTAAATGTCGATAATGAGAAGAGTTCAGTTGATGAGAATGCTGATAGTATGGATGAGTTAACGTTAGACGCGTTTTTTAGACGGTATACGAGTGAGGATAACGAGAGTTTTAGTAAACTGATTGAGAAGGTTAATAAGAGGAAGAGGGAGAGGTATGGGTTTTTGTTGGATGGGGAGAATCGTGGGACGGGTGGTTTGATTGAGGATGTGAAGAAGGATAGGATTACGGATGGGTATGGGACGTCGGATCAGCCTTTGGCGACTTTGGAGAGCTGGAAGTATACCGCCAAGAATTTGTTGATGTATCATCCGGCAGATAGAGGTGAAGTGGCGTTGACGAATGATGAGTTGGCGAATAGGATTAATGGGATGACTAAGGAGATTAGTAAGACGAATACAAGGTTTCATGGGAAGGTGAGTGATTATAGGGGTAGAGCGGATGATGAGGTTTCGGTGCTTTATAATCCGGTTGCTGGTGGGACTCCTGTTCCTTGGTCTTTGTCGGATAGGGATGGGGATAAGATGAAGAAGTATGATTTGGAGGAAATGAAGAAGACGCCTAATCCGTTTTATGTTGAGTCGAATAAGAAAGCGGATAATGGATATAGTTTTGTGAAGACGCCGTCACCTGCACCAGGTGTGGATGAGTCGCCGTTTATTACGTGGGGTGAGATTGAAGGGACGCCATTGAGATTGGAAGATGAAGATACTCCTATTGATATTGGTGGCAGTGGAAATGGGCCTCATTTTAATATCCCTCTTCCACCTTCACGGGATTTAAAGGCTCATTCTTTGTCAAGAGACGCTTCTCGGAAACTGAGGGATCGATCGCTGATGTTTCAGAAACCGCCATTGCATTCCCCAGCTAGAAGTGGTAGTGCTAGTCCTAGTGCGCGGACACTTTCACCTGCTGCACAGAAGTTTGTTAGAAATGCTATTGCCAAGTCTTCTCGTTCGGCTACTGTTGATGAATCGCTTCGTGCAAGTTATCGTGGGTCAAGTCCTGGATTAGCTACACCAAAATCTGGAAGAAGTACATCGAGGTTGGGAAGAGATGGTAGCGTGAGTTTGAGGTCACCGTCTGTAGGGGAGGGCTCTAATCGTCCTTGGTAA 1518 46.18 MLLSPGHSPRRLSSPSPSPSQTPSLNAVNSNPQNPRKRNSSSSTVLDEDTYVAAIEKIIERDYFPDIPKLRDRLDLLEASRTGDPMLIRDAQLKIIERRSGKTAGNDTAGKFRTPGSTFFRNSVSLGFDQTPVENVNVDNEKSSVDENADSMDELTLDAFFRRYTSEDNESFSKLIEKVNKRKRERYGFLLDGENRGTGGLIEDVKKDRITDGYGTSDQPLATLESWKYTAKNLLMYHPADRGEVALTNDELANRINGMTKEISKTNTRFHGKVSDYRGRADDEVSVLYNPVAGGTPVPWSLSDRDGDKMKKYDLEEMKKTPNPFYVESNKKADNGYSFVKTPSPAPGVDESPFITWGEIEGTPLRLEDEDTPIDIGGSGNGPHFNIPLPPSRDLKAHSLSRDASRKLRDRSLMFQKPPLHSPARSGSASPSARTLSPAAQKFVRNAIAKSSRSATVDESLRASYRGSSPGLATPKSGRSTSRLGRDGSVSLRSPSVGEGSNRPW 505
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aary5g02858 505 MobiDBLite consensus disorder prediction 447 463 - -
Aary5g02858 505 MobiDBLite consensus disorder prediction 470 505 - -
Aary5g02858 505 MobiDBLite consensus disorder prediction 9 45 - -
Aary5g02858 505 MobiDBLite consensus disorder prediction 396 414 - -
Aary5g02858 505 MobiDBLite consensus disorder prediction 423 439 - -
Aary5g02858 505 Coils Coil 249 269 - -
Aary5g02858 505 PANTHER ES-2 PROTEIN - RELATED 20 495 IPR019148 GO:0071013(PANTHER)
Aary5g02858 505 MobiDBLite consensus disorder prediction 1 45 - -
Aary5g02858 505 Pfam Nuclear protein Es2 43 443 IPR019148 -
Aary5g02858 505 MobiDBLite consensus disorder prediction 375 505 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aary5g02858 K13118 protein DGCR14
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Event-related genes

Select Gene_1 Gene_2 Event_name
168180 Aary5g02858 Aary13g03388
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aary Aary-Chr13:202809084 Aary5g02858 Aary-Chr5:174068862 wgd