AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aary5g02864 ATGGGGGGAAATGATAACAGTTTTGAATCCAAAAGAACTGTTTTTGTGACTGTGGGCACAACGTCTTTTGATTCTCTTGTTAAAGCTGTTGACACTGAGCAAGTTCAAGAAGCGTTGTTGAAGAAAGGATACACACATCTTGTAATTCAAATGGGTCGTGGATCTTACATCCCGAAAAAGTCTAGTGGTGAAGATGGATCGCTGGTTGTAGATTACTTTACATTTTCCCCAAGCATTGCAGACTATATGAAATCAGCATCTCTTGTCATAAGTCACGCAGGTTCAGGGAGCATATTTGAGACACTAAAACTGGCAAAACCTTTAATAGTCGTCGTTAATGAAGACTTGATGGATAACCATCAGAGTGAGCTTGCTGAAGAACTAGCAGAAAGGAAGCATTTGTTTTGTGCTCTCCCTCAAACGCTCTACCAAGTTATTGAATCTCTGGATTTGGATTCTATTGTACCATATCAATCAGGTGACGCTACTCCGGTTGCTAAACTAATCAATAGGCATCTTGGTTTTCCTGCTGATTGA 537 40.22 MGGNDNSFESKRTVFVTVGTTSFDSLVKAVDTEQVQEALLKKGYTHLVIQMGRGSYIPKKSSGEDGSLVVDYFTFSPSIADYMKSASLVISHAGSGSIFETLKLAKPLIVVVNEDLMDNHQSELAEELAERKHLFCALPQTLYQVIESLDLDSIVPYQSGDATPVAKLINRHLGFPAD 178
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aary5g02864 178 PANTHER UDP-N-ACETYLGLUCOSAMINE TRANSFERASE SUBUNIT ALG13 9 177 IPR052474 GO:0006488(PANTHER)|GO:0043541(PANTHER)
Aary5g02864 178 Gene3D Glycogen Phosphorylase B; 8 173 - -
Aary5g02864 178 SUPERFAMILY UDP-Glycosyltransferase-glycogen phosphorylase 42 145 - -
Aary5g02864 178 FunFam UDP-N-acetylglucosamine transferase subunit alg13 8 173 - -
Aary5g02864 178 Pfam Glycosyltransferase family 28 C-terminal domain 13 165 IPR007235 GO:0016758(InterPro)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aary5g02864 K07432 beta-1,4-N-acetylglucosaminyltransferase [EC:2.4.1.141]
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
168183 Aary5g02864 Aary13g03395
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aary Aary-Chr13:203115383 Aary5g02864 Aary-Chr5:174444300 wgd