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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aary5g02865 ATGGCTATAACTATAAGCTATACCCTTGTTCTACTTTTTTACCTTCTAGCATCTCATTTCAACATTATATCATCTGCACGAACGTGCTCAGACCACAGATTCACATCTAGTCGACTTTATACTTCTTGTCAAGATCTACCTCATTTATCTGCCCATCTCCATTGGACTTACAACTCATCAATGGGCATAGCCAAGATCGCGTACCGAGCCAAACAAGGGTCTCGTGGTTGGGTGGCTTGGGCCATTAATCCAAACCAAATAGGTATGGTTGGGTCAGAGGCAATTGTGGCATTCCATAACAGTAATGGGAGTATAACGGTTTATCCAACATTGATAACAAGTTACAGCCCGTCAATGCTTCCTGGAGATCTTAGCTTTCGGGTTTTGGGTCTTTCAGCTGACTTTGTGAATGATGAAATAACTATATATGCGACTGTGGGCCCGTTTGCAGGCGGATCCCTTGTGAATCAAGTGTGGCAAGCTGGGAATTTTGTTTTGAATGATGTACCGCAAATGCACGACGTTTCTCAGCAGAATCTACAGTCAACAGGGGAACTTGATTTCTTGTCTAGTTAG 576 43.06 MAITISYTLVLLFYLLASHFNIISSARTCSDHRFTSSRLYTSCQDLPHLSAHLHWTYNSSMGIAKIAYRAKQGSRGWVAWAINPNQIGMVGSEAIVAFHNSNGSITVYPTLITSYSPSMLPGDLSFRVLGLSADFVNDEITIYATVGPFAGGSLVNQVWQAGNFVLNDVPQMHDVSQQNLQSTGELDFLSS 191
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aary5g02865 191 ProSiteProfiles DOMON domain profile. 49 162 IPR005018 -
Aary5g02865 191 CDD DOMON-CIL1-like 40 190 IPR045265 -
Aary5g02865 191 Pfam Protein of unknown function (DUF568) 89 188 IPR045265 -
Aary5g02865 191 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 10 190 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aary5g02865 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
4570 Aary10g05255 Aary5g02865
8200 Aary17g02480 Aary5g02865
168184 Aary5g02865 Aary13g03396
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aary Aary-Chr13:203117275 Aary5g02865 Aary-Chr5:174446238 wgd
Aary Aary-Chr17:147565763 Aary5g02865 Aary-Chr5:174446238 wgd