AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aary5g02866 | ATGAGTAAAATCTTAGCTATTCTTTTTTGCATCTTGTTAACAAATTTATCAGTTTCGTACGCTCAAAACTGTAATAATTTTGCTTTTCCTAGTAACGCGGTATACGCGACATGTGTCACGTTACCAGTTTTAAACTCACATCTTCATTGGAACTACCATACTAATGGTACAGTTGACGTGGCATTTCGTCACACTGGATCCACCACAAACCAATGGGTGGCATGGGCCTTAAATACTGAACGGCCAGGTATGGTTGGTGCACAAGCCCTTGTAGCATTAACAAGCTCAAACGGGTCGGTTGAAGCTTATACTAGTGCTGTAACAAGCTATAATACTGGTTTACAACGGAGTTCTTTAAGCTTTGAGGTGCCCTTGATTAGAAGTGAGAGAGTTAATGGAGATGTGATTATTTATGCAACGTTGGTTTTGCCACGTGGAGGGACGACATTTAATCAAGTGTGGCAAGTGGGTCCGGTTACTAATGGAGCTCCGAGTATTCATGCGTTGGGTTCGGATAATAGGAACTCGATTGGGACGGTTGACTTTAGTACTGGTCAAACTGGTGCTGGTGGTAATGTTGGTGGATCACGGATGCGAAGGAGGAATACTCATGGAGTATTAAACGCTGTTAGTTGGGGAGTATTGATGCCTATGGGAGCTATGACAGCAAGATATTTAAAGGTGTTTAAAGTAGCTAATCCAGCCTGGTTCTATATCCATGCTGCTTGCCAAACATCAGCCTATGGTGTAGGTGTAGCGGGATGGGCCACTGGACTCAAGCTCGGCAGTGACTCAGCCGGAATCACTCACACGAGTCATCGCAACATTGGAATCATCCTCTTTGCACTTGGAACGCTTCAGGTTTTTGCCTTGCTGTTGAGGCCTAAGCCAGACAACAAGTACAGATTTTATTGGAACATATACCACCATGGCCTTGGATACTCGGTTATCATCTTGAGCATTATCAACGTCTACGAGGGACTTGATATCTTGGACCCTGAGAAGAAGTGGAAGGACGCGTACAGCGGCATACTTATCTCTTTGGGGGTTATCACGGTTCTGTTAGAAGCTTTAACATGGTTCATCGTTTTGAAGAGGAAGAAGGAAGACAAAAGGACACATGCAGGGACTAATGGTTCATACGGAGCCAATGGAGTTGCGTAG | 1164 | 44.42 | MSKILAILFCILLTNLSVSYAQNCNNFAFPSNAVYATCVTLPVLNSHLHWNYHTNGTVDVAFRHTGSTTNQWVAWALNTERPGMVGAQALVALTSSNGSVEAYTSAVTSYNTGLQRSSLSFEVPLIRSERVNGDVIIYATLVLPRGGTTFNQVWQVGPVTNGAPSIHALGSDNRNSIGTVDFSTGQTGAGGNVGGSRMRRRNTHGVLNAVSWGVLMPMGAMTARYLKVFKVANPAWFYIHAACQTSAYGVGVAGWATGLKLGSDSAGITHTSHRNIGIILFALGTLQVFALLLRPKPDNKYRFYWNIYHHGLGYSVIILSIINVYEGLDILDPEKKWKDAYSGILISLGVITVLLEALTWFIVLKRKKEDKRTHAGTNGSYGANGVA | 387 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aary5g02866 | 387 | CDD | DOMON-CIL1-like | 35 | 184 | IPR045265 | - | |
| Aary5g02866 | 387 | Pfam | Protein of unknown function (DUF568) | 84 | 182 | IPR045265 | - | |
| Aary5g02866 | 387 | PANTHER | CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN | 6 | 368 | - | - | |
| Aary5g02866 | 387 | ProSiteProfiles | Cytochrome b561 domain profile. | 163 | 364 | IPR006593 | - | |
| Aary5g02866 | 387 | Pfam | Eukaryotic cytochrome b561 | 204 | 328 | IPR006593 | - | |
| Aary5g02866 | 387 | CDD | Cyt-b561-FRRS1-like | 179 | 357 | - | - | |
| Aary5g02866 | 387 | SMART | 561-7 | 203 | 328 | IPR006593 | - | |
| Aary5g02866 | 387 | FunFam | Cytochrome b561 and DOMON domain-containing protein | 182 | 372 | - | - | |
| Aary5g02866 | 387 | Gene3D | - | 183 | 374 | - | - | |
| Aary5g02866 | 387 | PIRSF | UCP037471 | 1 | 385 | IPR017214 | - | |
| Aary5g02866 | 387 | ProSiteProfiles | DOMON domain profile. | 44 | 157 | IPR005018 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aary5g02866 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 8197 | Aary17g02478 | Aary5g02866 | |
| 9861 | Aary5g02866 | Aary9g02601 | |
| 168185 | Aary5g02866 | Aary13g03397 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Aary | Aary-Chr10:288550209 | Aary5g02866 | Aary-Chr5:174537561 | dispersed | |
| Aary | Aary-Chr13:65612596 | Aary5g02866 | Aary-Chr5:174537561 | dispersed | |
| Aary | Aary-Chr5:49788006 | Aary5g02866 | Aary-Chr5:174537561 | dispersed | |
| Aary | Aary-Chr5:109135984 | Aary5g02866 | Aary-Chr5:174537561 | dispersed | |
| Aary | Aary-Chr5:174537561 | Aary9g02603 | Aary-Chr9:156371113 | dispersed | |
| Aary | Aary-Chr10:288519058 | Aary5g02866 | Aary-Chr5:174537561 | wgd | |
| Aary | Aary-Chr13:203140348 | Aary5g02866 | Aary-Chr5:174537561 | wgd | |
| Aary | Aary-Chr17:147519058 | Aary5g02866 | Aary-Chr5:174537561 | wgd | |
| Aary | Aary-Chr5:174537561 | Aary9g02601 | Aary-Chr9:156306816 | wgd |