Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aary5g02878 | ATGCAGTTCTCGATGACCATAACAAACCCATCATTCACATACCCGTCACCTATCCACCAATCCAAACACCACCCAATGTTTCCTCTCAAAACCCCATCAAAACCCCACCTCATAAAATCCCAAAAAAACTCAGGGTTTTTATCAGCAATTGGTAATGCAATTGAAGAGCAAGAATATAGGAAAGCTAGAGCTGAAGTTATAAGGAAAGGGACTGGTTTAGATGGTTATAATATTGAAGGGATTTCAATTGGTGGTCATGAAACTTGTGTTATTATTCCTGAATTGAAATGTGCTTTCGATATTGGCCGGTGTCCTGCGCGAGCTGTGGCGATGAATTTCTTGTTTATTACTCATGGACATCTTGATCATATTGGTGGGCTACCCATGTATATTGCTACACGTGGTTTATACAGCATGACTCCACCCACTGTATTTGTACCTCCTTCCATCAAAGATGATGTTGAAAACTTGATTGAGCTTCACAGGAAGATGGGTCAAGTGGAATTGAATGTTGATTTGGTTGCATTGGATATAGGAGAAACATACGAGCTACGAAACGACCTTGTTGTACGCCCATTTAAAACACACCATGTCATACCGAGTCAGGGTTATGTCATTTACTCTGTTCGCAAGAAGCTCAAGAAGCAATATATTCATCTAAAAGGAAGGGAGATTGAGAAAAAGAAGAAATCTGGTGTCGAGATAACGGATATCATATTGTCTCCTGAGGTGGCATTCACCGGAGATACAACTTCTGATTTTCTACTTGATCCAAGAAGCTCTGATGCCTTGAGAGCAAAAGTTCTTATAACTGAGGCTACATTTTTGGACAATAAATGTGACATTGAGCATGCACGAGAACATGGTCACATGCATATTGACGAGATTATAGAGAATGCTAAGTGGATCCGTAACAATGCCATTCTTTTGACCCATTTCTCCTCCCGCTACCATATTGAGGAAATTCGACAAGCTGTGACGAAGTTACAGTCGAAGGTTTCAGCCAAAGTGGTTCCGCTTACAGAAGGTTTTAGATCAATGTACTCATCATAA | 1053 | 40.46 | MQFSMTITNPSFTYPSPIHQSKHHPMFPLKTPSKPHLIKSQKNSGFLSAIGNAIEEQEYRKARAEVIRKGTGLDGYNIEGISIGGHETCVIIPELKCAFDIGRCPARAVAMNFLFITHGHLDHIGGLPMYIATRGLYSMTPPTVFVPPSIKDDVENLIELHRKMGQVELNVDLVALDIGETYELRNDLVVRPFKTHHVIPSQGYVIYSVRKKLKKQYIHLKGREIEKKKKSGVEITDIILSPEVAFTGDTTSDFLLDPRSSDALRAKVLITEATFLDNKCDIEHAREHGHMHIDEIIENAKWIRNNAILLTHFSSRYHIEEIRQAVTKLQSKVSAKVVPLTEGFRSMYSS | 350 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aary5g02878 | 350 | PANTHER | TRNASE Z TRZ1 | 35 | 344 | - | - | |
| Aary5g02878 | 350 | Gene3D | - | 76 | 345 | IPR036866 | - | |
| Aary5g02878 | 350 | Pfam | Beta-lactamase superfamily domain | 110 | 313 | IPR001279 | - | |
| Aary5g02878 | 350 | SUPERFAMILY | Metallo-hydrolase-oxidoreductase | 110 | 327 | IPR036866 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aary5g02878 | K00784 | ribonuclease Z [EC:3.1.26.11] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 168195 | Aary5g02878 | Aary13g03426 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Aary | Aary-Chr11:33417090 | Aary5g02878 | Aary-Chr5:175594589 | dispersed | |
| Aary | Aary-Chr3:24985844 | Aary5g02878 | Aary-Chr5:175594589 | dispersed | |
| Aary | Aary-Chr13:205856772 | Aary5g02878 | Aary-Chr5:175594589 | wgd |