AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aary5g02890 ATGAAGACATGTGACAACAGTCGTCGTCATTTTTATCCATTGACAAGTTTCCAGATCGGAGATTTGCAGTCTTATCTTTCAGATCTTACTCTATATTTGGCGCCCGATAGGAAGACGTTCTATGTATTGGTGGATAATAGGCCATGGCTGGAAGATTTGCCATCGCGCCCTGCGCACCTATGGCAGCTAATGGTTACCAAGTCGAGGATGTCTCCTTTTGCCAACACTAGAGGGCGAAAGGGGAAGAACAAGACTAGAGAGTTTGTCGACAAGAAGGACAGCTCTAAAGGTTTAAGCAAGTCTCAAAATTTGAAAAAATGGTTCTCGGTTGTTGATGCTGCAACATTGTCCAAAAAGAGGGCGTTGTTACCTGTAAAGAAACTTAGGACTTCGTTGCTAGCTAATAGCAAATTGCATAGAACTTTGTTTGGGTTTATTGTCTTTCAAGTGGCGTGGAAAGATGTTCGTGGTATGAATTACTTGAATGAGCTTCAGACTGATACTTCTCTTGCGATTGAGGCTAAATGCATGAAGAGATGGGAATTTGATAGCATAGCTCAAGCAGCAAAATGCATAACTACATGGTTTCCTGGCACACCACGCGAACGATGTCTTTTGGAAGAGCACCTCGACTCTATGTTAGGAGATGTGTTCCATGATGCCCCTAAAGAGTTTCCAGACCACCAAAATACAAATCATGATGAAAATACCCCGATTACTAGTGTACAGAAGGAGAATGAATCTCCCTGCACTCCTCGTTGCAATCTTGGGGATATACTAGAAACTTTAGTAGAAGAAACAAATTGTAAAACAAATACAGTACATACACCTCCACCTGCTGGACCCTATAAAAGAAGAAAACTAATGAGTCCCACGGCACTTGATATCAAGCCTAATTTTTATGCTGAAGTAGCTCATGGTGCCTCTTCTTATGCAAATGAGTGTGATGAAACAGCTGAAGCTACCGAATACAGGGATGTGTTGCTTATATTCCGGTTCAATGATCATGACCTCCCTTTTGAATTACAAAAGATAATAGTATCTGATTTGCGATTACTTACTTTATTAGAAGCTGGACTTCCGTCATGGGTGATTTTTTGTCAGTCTTACCCTGTATTTTGTCATATTTATCGTCCATGGATGGCTCTTCTGGCAAGAGTTCTATATGTGATAATTTCCATTGTTACGGTGGTCATTGGTTTCTATGATCTGTACAAAAACGTCCCCGTTCTTAAAGCAACTGCTTCTCGGTTATGTGGGCCACTTTTTGATTGGATAGAAACCTGGGAGATGGTATCGAGAATCAAGTATTTGGGAACTATGTTGTTTTTGCATAATTCTGAGAAGGCTGTTATGTGGTTCTTGATGATGACTCGCACTGTTCGATCATTTTTTTCGATTATCACACAGCCGTTAGCTGGGCCGTTTGTTGAATTTTTGGATGTTCTTTTTCCAGTTTGGAACTTAATTGTCGAAACTGGACAGTATTTGTGCTCGTTCGTTTGGATTCTAATGGAAACTTCATGGGATGTAGCTGAGAATCTGTTTGAAGTCGTCCTGCTTCCTGTCTGGTTTCTCTTGTCATTTATTTGGATGATTGTAAAAAGTGTTATGTACCCGATAATTTGGTGCCTTTGGGGGATACTCTATGCTCCGATTAGTCTCATACTTGGTTTATCCAGTTTTGTGGGATTTGTTTATAATGAAATATATGATTTGGCTAGAGACATATGGCTGTTTATGAGTGGTATCTTCAAGTTAGCTTCAAGTGCTGAGGCGACAGTGCATACATACGAGGTTTCTGTTTGGCGGTCTCTTTGGAATGACCTCTTCTCACAGGTTTTCCGCGCTGTTCGGAGTATTTTACACGGGTTTGTTGCATTCTTTGCAGCTTGTAATAGACACCGATTAAGCATATATAATCATATACAGGAGCTCATTCGAACAGTCAATCATCCATCCCAGAGGTCACAGACCTTGAATCCTAGCTGTGAACCACAGCCGTTGAAATCTAGCCGTGGATCACAGAAATCTGGAATTCAGATACCGGAAGAAGTCGGGGAACAAAAGCTCCGATCCAGAAGAAGCCTGAAGATGAAGAACTATGTTCATTTGTAA 2118 41.03 MKTCDNSRRHFYPLTSFQIGDLQSYLSDLTLYLAPDRKTFYVLVDNRPWLEDLPSRPAHLWQLMVTKSRMSPFANTRGRKGKNKTREFVDKKDSSKGLSKSQNLKKWFSVVDAATLSKKRALLPVKKLRTSLLANSKLHRTLFGFIVFQVAWKDVRGMNYLNELQTDTSLAIEAKCMKRWEFDSIAQAAKCITTWFPGTPRERCLLEEHLDSMLGDVFHDAPKEFPDHQNTNHDENTPITSVQKENESPCTPRCNLGDILETLVEETNCKTNTVHTPPPAGPYKRRKLMSPTALDIKPNFYAEVAHGASSYANECDETAEATEYRDVLLIFRFNDHDLPFELQKIIVSDLRLLTLLEAGLPSWVIFCQSYPVFCHIYRPWMALLARVLYVIISIVTVVIGFYDLYKNVPVLKATASRLCGPLFDWIETWEMVSRIKYLGTMLFLHNSEKAVMWFLMMTRTVRSFFSIITQPLAGPFVEFLDVLFPVWNLIVETGQYLCSFVWILMETSWDVAENLFEVVLLPVWFLLSFIWMIVKSVMYPIIWCLWGILYAPISLILGLSSFVGFVYNEIYDLARDIWLFMSGIFKLASSAEATVHTYEVSVWRSLWNDLFSQVFRAVRSILHGFVAFFAACNRHRLSIYNHIQELIRTVNHPSQRSQTLNPSCEPQPLKSSRGSQKSGIQIPEEVGEQKLRSRRSLKMKNYVHL 705
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aary5g02890 705 MobiDBLite consensus disorder prediction 232 247 - -
Aary5g02890 705 MobiDBLite consensus disorder prediction 74 98 - -
Aary5g02890 705 MobiDBLite consensus disorder prediction 80 98 - -
Aary5g02890 705 MobiDBLite consensus disorder prediction 226 247 - -
Aary5g02890 705 PANTHER OS05G0597400 PROTEIN 1 680 - -
Aary5g02890 705 MobiDBLite consensus disorder prediction 653 679 - -
Aary5g02890 705 MobiDBLite consensus disorder prediction 653 687 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aary5g02890 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
9284 Aary2g01815 Aary5g02890
168202 Aary5g02890 Aary13g03436
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aary Aary-Chr17:146653238 Aary5g02890 Aary-Chr5:176371937 dispersed
Aary Aary-Chr2:130009186 Aary5g02890 Aary-Chr5:176371937 dispersed
Aary Aary-Chr2:130027957 Aary5g02890 Aary-Chr5:176371937 dispersed
Aary Aary-Chr5:176371937 Aary9g02575 Aary-Chr9:155636166 dispersed
Aary Aary-Chr13:206321045 Aary5g02890 Aary-Chr5:176371937 wgd