Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aary5g02909 | ATGGCTACAAGTTCAGAAATCGGGCTTGCAGCAGCTATAAATATCCTCACTGCATTTGCCTTTTTGGTTGCTTTTGCTATACTTCGGATACAGCCGCTCAATGATAGAGTTTATTTTCCAAAATGGTATTTAAAGGGGTTAAGAAATAACCCACTTCAGTCAGGTGCATTTGTGAAGAAGTTTGTGAACTTGGACTTCAGATCATACTTGAGGTTTCTGAACTGGATGCCAGCTGCATTGCGTATGCCGGAGCCTGAGCTTATTGATCATGCTGGATTGGATTCCGTTGTTTACTTGAGAATTTACTTGACCGGACTCAAAATTTTTGTTCCAATTGCATGCCTTGCTTTCACAGTCATGGTGCCAGTCAATTGGACTAATCGGACTTTAGAGGAGTCTAAACTAACATACAGTGACATAGACAAGCTTTCAATATCCAACATTCCGAAAGGTTCAAACAGGTTCTTTACCCATTTAGTCATGGCTTACGCCTTTACATTTTGGACCTGTTATATTTTGAAGAGAGAGTATTCGATAATTGCAAAAATGAGGCTGCATTTTATTGCATCAGAACAACGGCGGCCTGATCAATTTACTGTGCTAGTGAGAAACGTGCCTCCAGACCCTGATGAGACGGTCAATGAACTTGTGGAGCATTTTTTTCTGGTCAACCATCCAGATCATTATTTATCTCATCAGGTTGTTTACAATGCAAACTTACTCTCCAAGTTGGTGAATGAGAAGAAAACAAAGAGGAATTGGCTTGACTATTATCAACTGAAATATGACAGAAGTAACCAGTCAAAAAGGCCATTGATGAAGACGGGTTATCTTGGCCTGTTCGGGAAGAGTGTGGATGCTATTGATTATTATCAATCTGAGATTGAGAAGCTATCGAAGGAAATATCTAAGGAGAGGGAAAAGATTATAACAAGCTCCAAATATGTTATGCCGGCTGCATTTGTTTCTTTTAAATCACGATGGGGTGCTGCAGTTTGTGCACAAACTGAACAATCCAGGAACCCGACTATTTGGCTAACCGAATGGGCCCCGGAACCCCGTGATGTTTATTGGGATAATCTTGCCATTCCATTTGTTTCACTCACAGTTAGAAGACTCATAATTGCTGTGGCATTTTTCTTCCTTACATTTTTCTTCATGATCCCGATAGCATTTGTACAGTCACTTGCAAATATCGATGGAATAGTGAAAGCAGCTCCTTTTATGCGAGGCATTATGGAAGTGGAATTTGTCAAATCATTCATTCAAGGTGTTCTGCCGGGAATTGCTCTGAAGATATTCCTTGTCTTTTTACCTTCAATCTTGATGATGATGTCTAAGTTTGAAGGGTTCACCTCCATATCGGCTCTAGAGAGAAGATCTGCATCAAGATATTATATTTTCCAATTTATCAATGTCTTTCTTGGGAGCATAATCACTGGGACTGCATTTCAACAGCTAAATACATTCATCCACCAGCCTGCAAACACTATCCCGGTGACAATTGGGGCATCTATACCGATGAAAGCAACCTTCTTTATAACTTATATCATGGTAGATGGATGGGCTGGAGTTGCTGGGGAGATTCTGAGGTTAAAACCACTAATATTCTACCACTTAAAGAACTTTTTCTTGGTGAAGACCGAAAAAGATAGGGAAGAAGCAATGAATCCTGGAAGTTTATCATTCAACACGGGTGAACCTCAAATCCAGCTTTATTTCTTACTTGGCCTTGTTTATGCTGTTGTCACCCCAATTCTGCTTCCATTCATAGTCGTATTCTTTGGGCTGGCTTATGTTGTATACCGTCATCAGATTATAAATGTGTATAATCAGCAGTATGAAAGTGCAGGATCTTTCTGGCCTGACGTTCATGGCCGCATAATTACTGCATTGATCGTTTCACAGTTGCTTCTAATGGGTCTGCTTAGCACTAAAGAAGCTGCCCAGTCAACTCCATTGCTTATTGCACTCCCTGTGCTTACCATATGGTTTCATAGATTCTGTAAGGGGCGGTACGAACCAGCTTTTATTAGGTTCCCTTTACAGGAGGCCATGATCAAAGACACACTAGAACGTGCAAGGGAGCCGTGCCTAAACGTCAAAGGTTATTTAGAAAATGCATATGTTCACCCAGTATTTTACAATGAAGACAGATGGGACGGTAGTGATGATGGGATCAGCGATGAGGAGTCACAGAAAGAACCACCTCTGGTTGCCACAAAGCGCCCTTCACGAACAAACACACCAGCAAGAAGTCAGCGAAGTGAGTCAACACGAACCTTGTTGGGTGTCACAGATGAAAGATCTTGCCCTTAA | 2319 | 41.22 | MATSSEIGLAAAINILTAFAFLVAFAILRIQPLNDRVYFPKWYLKGLRNNPLQSGAFVKKFVNLDFRSYLRFLNWMPAALRMPEPELIDHAGLDSVVYLRIYLTGLKIFVPIACLAFTVMVPVNWTNRTLEESKLTYSDIDKLSISNIPKGSNRFFTHLVMAYAFTFWTCYILKREYSIIAKMRLHFIASEQRRPDQFTVLVRNVPPDPDETVNELVEHFFLVNHPDHYLSHQVVYNANLLSKLVNEKKTKRNWLDYYQLKYDRSNQSKRPLMKTGYLGLFGKSVDAIDYYQSEIEKLSKEISKEREKIITSSKYVMPAAFVSFKSRWGAAVCAQTEQSRNPTIWLTEWAPEPRDVYWDNLAIPFVSLTVRRLIIAVAFFFLTFFFMIPIAFVQSLANIDGIVKAAPFMRGIMEVEFVKSFIQGVLPGIALKIFLVFLPSILMMMSKFEGFTSISALERRSASRYYIFQFINVFLGSIITGTAFQQLNTFIHQPANTIPVTIGASIPMKATFFITYIMVDGWAGVAGEILRLKPLIFYHLKNFFLVKTEKDREEAMNPGSLSFNTGEPQIQLYFLLGLVYAVVTPILLPFIVVFFGLAYVVYRHQIINVYNQQYESAGSFWPDVHGRIITALIVSQLLLMGLLSTKEAAQSTPLLIALPVLTIWFHRFCKGRYEPAFIRFPLQEAMIKDTLERAREPCLNVKGYLENAYVHPVFYNEDRWDGSDDGISDEESQKEPPLVATKRPSRTNTPARSQRSESTRTLLGVTDERSCP | 772 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aary5g02909 | 772 | Pfam | Late exocytosis, associated with Golgi transport | 9 | 176 | IPR032880 | - | |
| Aary5g02909 | 772 | MobiDBLite | consensus disorder prediction | 723 | 737 | - | - | |
| Aary5g02909 | 772 | PANTHER | PROBABLE MEMBRANE PROTEIN DUF221-RELATED | 10 | 727 | IPR045122 | GO:0005227(InterPro)|GO:0005227(PANTHER)|GO:0005886(PANTHER) | |
| Aary5g02909 | 772 | MobiDBLite | consensus disorder prediction | 742 | 765 | - | - | |
| Aary5g02909 | 772 | Coils | Coil | 288 | 308 | - | - | |
| Aary5g02909 | 772 | MobiDBLite | consensus disorder prediction | 723 | 772 | - | - | |
| Aary5g02909 | 772 | Pfam | Calcium-dependent channel, 7TM region, putative phosphate | 371 | 643 | IPR003864 | GO:0016020(InterPro) | |
| Aary5g02909 | 772 | Pfam | Cytosolic domain of 10TM putative phosphate transporter | 197 | 360 | IPR027815 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aary5g02909 | K21989 | calcium permeable stress-gated cation channel |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 168213 | Aary5g02909 | Aary13g03457 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Aary | Aary-Chr5:36664592 | Aary5g02909 | Aary-Chr5:177417052 | dispersed | |
| Aary | Aary-Chr5:36677601 | Aary5g02909 | Aary-Chr5:177417052 | dispersed | |
| Aary | Aary-Chr5:177417052 | Aary6g03109 | Aary-Chr6:197001176 | dispersed | |
| Aary | Aary-Chr4:111896863 | Aary5g02909 | Aary-Chr5:177417052 | transposed | |
| Aary | Aary-Chr13:207677706 | Aary5g02909 | Aary-Chr5:177417052 | wgd | |
| Aary | Aary-Chr13:7774114 | Aary5g02909 | Aary-Chr5:177417052 | wgd | |
| Aary | Aary-Chr13:2568665 | Aary5g02909 | Aary-Chr5:177417052 | wgd |