AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aary5g02918 ATGGCAATAAACAGGGTTGGATCAGGAGGATGTAATCCAGCAATAGTAAAGATGTTAATAACATTTATAGGAATAAGTATGGTTGGTTATTTAATAGGTCCACCTTTATATTGGCATCTTCTTGAAGCCCTTCATCGCTCTTCTGTTGCTGCTGTTTCTTGCCCTGTTTGCAACTGTGATTGTGATTCTCAACCTCTCCTCTCCATTCCTCAAGCGCTAAGCAACGGTTCCTTCACAGATTGTGCAAAGCATGATCCTGAAGTGAGTGGAGACACAGAAAAGAATTTCGTCGAGCTTCTCTCTGAAGAATTAAAGCTACGTGAAGCTGAAGCTCTAGAAAGTCAACAACGTGCTGACATGGCACTTCTCGAGGCCAAGAAGTTAACATCCCAATATCAAAAAGAAGCAGACAAGTGTAATTCAGGAATGGAAACTTGTGAAGAAGCTCGTGAAAAAGCCGAAGCAGCTTTACTAGCACAAAAACAACAAAGTGAAATGTGGGAATTAAGAGCCAAACAAAGAGGTTGGAAAGAAGGCAGTACTAAGTCTGTAAACACTGCTTGA 564 41.13 MAINRVGSGGCNPAIVKMLITFIGISMVGYLIGPPLYWHLLEALHRSSVAAVSCPVCNCDCDSQPLLSIPQALSNGSFTDCAKHDPEVSGDTEKNFVELLSEELKLREAEALESQQRADMALLEAKKLTSQYQKEADKCNSGMETCEEAREKAEAALLAQKQQSEMWELRAKQRGWKEGSTKSVNTA 187
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aary5g02918 187 Coils Coil 106 126 - -
Aary5g02918 187 Pfam Protein of unknown function (DUF1068) 14 179 IPR010471 -
Aary5g02918 187 PANTHER EXPRESSED PROTEIN 10 184 - -
Aary5g02918 187 Coils Coil 143 163 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aary5g02918 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
8160 Aary17g02439 Aary5g02918
9867 Aary5g02918 Aary9g02565
168217 Aary5g02918 Aary13g03465
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aary Aary-Chr13:207944109 Aary5g02918 Aary-Chr5:177875503 wgd
Aary Aary-Chr17:146378937 Aary5g02918 Aary-Chr5:177875503 wgd
Aary Aary-Chr5:177875503 Aary9g02565 Aary-Chr9:155355138 wgd