AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aary5g02927 | ATGGAAGATCGTGGCGACGGTGGTGGTAGTGACGGCGACGGTGGAGGACCGGTGGTGGTGGTGTTGATGGTGAATGTAAAGACAAGGAAACTGACAAGTGCACACTACAAGTACAACATAAACAAAACTGCTTTTGTTCTGTACTTTTGTCGTGCCTTTGCTTTACACACACGCATTCCACATTCTTGCATTCACGCAGAACTAGATATGGGTACTCTACTCAAAGCGAGCTTGTTCTTGTCGTTCCTGTTGCTTCTTCTCGCACCTACTGCTTATTCAGCTGCCAATGGTAAATTGGTTAGAGTTGGACTAAAGAAGAGGAAAATCAACCAATTGAACCAACTTAGTGGACACGCGGGCTCAAAAGAAAGATACGCTGGAAGAAATTCTGGTATCCTTGGTAATATCAGGGACTCAGATAGTGACACTATAGCTCTAACCAACTACATGGACGCCCAGTATTATGGTGAGATTGGTGTAGGCACTCCACCTCAAAAGTTCACCGTGATTTTTGATACAGGGAGTTCTAATCTTTGGGTGCCTTCAGCAAAATGCTACTTCTCAGTGGCCTGCCTATTCCACTCAAAGTATAAGTCTAGCCAATCAAGTACTTATAAGAAAAATGGGAAATCTGCGGCAATTCAATATGGAACTGGCTCGATCTCAGGTTTCTTTAGCCAAGATTCTATCACACTTGGTGATCTTGTTGTTAACAAGCAGGATTTTATCGAGGCAACCAAAGAGCCTGGAGTAACTTTCTTGGCAGCGAAATTTGATGGTATTCTTGGCCTTGGGTTTAAAGAGATATCTGTTGGGGATGCTGTTCCTGTTTGGTACAACATGGTGGAACAAGGTCTTGTTAAAGAACCGGTATTTTCATTTTGGTTTAATCGCAATGTCGAAGAGAATGAAGGGGGTGAACTTGTGTTTGGTGGGATTGATGCTAATCATTTCAAGGGTGATCACACGTATGTCCCTGTGACTCAAAAAGGCTATTGGCAGTTCGACATGGGTGATGTCCTTATTGCTGATAAAACAACTGGATTTTGCTCCGATGGTTGTGCAGCAATTGCTGACTCTGGAACCTCTTTGTTGGCTGGTCCAACGGCTGTTATTACTCAAATCAATCAAGCCATTGGTGCTGAGGGTGTTATGAGCCAACAATGCAAGACATTGGTCGATCATTATGGGAAGACTATTATTGAGAGGCTGTTAACTGAGACACGGCCTGATAAAATCTGCTCTCAAATGAAGCTATGCACCTTTGATGGATCTCATGATACCGGCATGATCATTGAGAGCGTGGTTGACAAGAAAAATGGCAAATCTTCTGGCTTGCATGATGAGATTTGTAAATATTGTGAGATGGCAGTTGGTTGGATGGAAAACCAGATCAAGAGGAACCAAAGTGAAAAAGATATAATTCACTATGCTGATCAGCTATGCGAGAAGTTGCCAAGTCCAATGGGAGAATCTGGAGTTGACTGCAACAAACTTTCCTCCATGCCTAAAATCGCTTTTACTATTGGTGGTAAAAAGTTTGACCTCTCCCCTCAAGAGTATATCTTGAAAGTTGGCGAGGGAACAGCAGCACAATGCATCAGTGGATTCACTGCTATGGATGTGGCTCCTCCTCGTGGACCTCTTTGGATCCTGGGTGACATTTTCATGGGTAAATACCATACGGTATTCGACTATGGTAACTCGCGAGTTGGATTTGCAGAAGCAGCTTAA | 1734 | 43.43 | MEDRGDGGGSDGDGGGPVVVVLMVNVKTRKLTSAHYKYNINKTAFVLYFCRAFALHTRIPHSCIHAELDMGTLLKASLFLSFLLLLLAPTAYSAANGKLVRVGLKKRKINQLNQLSGHAGSKERYAGRNSGILGNIRDSDSDTIALTNYMDAQYYGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSVACLFHSKYKSSQSSTYKKNGKSAAIQYGTGSISGFFSQDSITLGDLVVNKQDFIEATKEPGVTFLAAKFDGILGLGFKEISVGDAVPVWYNMVEQGLVKEPVFSFWFNRNVEENEGGELVFGGIDANHFKGDHTYVPVTQKGYWQFDMGDVLIADKTTGFCSDGCAAIADSGTSLLAGPTAVITQINQAIGAEGVMSQQCKTLVDHYGKTIIERLLTETRPDKICSQMKLCTFDGSHDTGMIIESVVDKKNGKSSGLHDEICKYCEMAVGWMENQIKRNQSEKDIIHYADQLCEKLPSPMGESGVDCNKLSSMPKIAFTIGGKKFDLSPQEYILKVGEGTAAQCISGFTAMDVAPPRGPLWILGDIFMGKYHTVFDYGNSRVGFAEAA | 577 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aary5g02927 | 577 | ProSiteProfiles | Peptidase family A1 domain profile. | 154 | 574 | IPR033121 | - | |
| Aary5g02927 | 577 | Pfam | Saposin-like type B, region 1 | 450 | 486 | IPR007856 | GO:0006629(InterPro) | |
| Aary5g02927 | 577 | SUPERFAMILY | Saposin | 385 | 486 | IPR011001 | - | |
| Aary5g02927 | 577 | CDD | phytepsin | 144 | 575 | IPR033869 | GO:0004190(InterPro) | |
| Aary5g02927 | 577 | ProSiteProfiles | Saposin B type domain profile. | 447 | 488 | IPR008139 | - | |
| Aary5g02927 | 577 | Pfam | Eukaryotic aspartyl protease | 153 | 576 | IPR033121 | - | |
| Aary5g02927 | 577 | ProSitePatterns | Eukaryotic and viral aspartyl proteases active site. | 356 | 367 | IPR001969 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Aary5g02927 | 577 | Gene3D | Acid Proteases | 313 | 577 | IPR021109 | - | |
| Aary5g02927 | 577 | SUPERFAMILY | Acid proteases | 79 | 576 | IPR021109 | - | |
| Aary5g02927 | 577 | Gene3D | - | 384 | 486 | - | - | |
| Aary5g02927 | 577 | FunFam | Lysosomal aspartic protease | 140 | 382 | - | - | |
| Aary5g02927 | 577 | PRINTS | Pepsin (A1) aspartic protease family signature | 550 | 565 | IPR001461 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Aary5g02927 | 577 | PRINTS | Pepsin (A1) aspartic protease family signature | 160 | 180 | IPR001461 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Aary5g02927 | 577 | PRINTS | Pepsin (A1) aspartic protease family signature | 356 | 367 | IPR001461 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Aary5g02927 | 577 | PRINTS | Pepsin (A1) aspartic protease family signature | 306 | 319 | IPR001461 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Aary5g02927 | 577 | FunFam | Vacuolar aspartic proteinase | 469 | 576 | - | - | |
| Aary5g02927 | 577 | Gene3D | Acid Proteases | 100 | 312 | IPR021109 | - | |
| Aary5g02927 | 577 | ProSitePatterns | Eukaryotic and viral aspartyl proteases active site. | 169 | 180 | IPR001969 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Aary5g02927 | 577 | ProSiteProfiles | Saposin B type domain profile. | 384 | 424 | IPR008139 | - | |
| Aary5g02927 | 577 | PANTHER | BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED | 82 | 576 | IPR001461 | GO:0004190(PANTHER)|GO:0004190(InterPro)|GO:0006508(PANTHER)|GO:0006508(InterPro) | |
| Aary5g02927 | 577 | Pfam | Saposin-like type B, region 2 | 387 | 420 | IPR008138 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aary5g02927 | K08245 | phytepsin [EC:3.4.23.40] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 8153 | Aary17g02434 | Aary5g02927 | |
| 9870 | Aary5g02927 | Aary9g02560 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Aary | Aary-Chr5:178428815 | Aary9g02560 | Aary-Chr9:155290433 | dispersed | |
| Aary | Aary-Chr5:178428815 | Aary5g02936 | Aary-Chr5:179000358 | proximal | |
| Aary | Aary-Chr13:208868987 | Aary5g02927 | Aary-Chr5:178428815 | wgd | |
| Aary | Aary-Chr17:146289459 | Aary5g02927 | Aary-Chr5:178428815 | wgd |