Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aary5g02942 | ATGAAGCAATGGAGCATGAAGACTACATTGTTAATGTTACTAGCAATGTTGTATACTATAAATGGTGAAGACCCTTATAGATTCTTTGATTGGAATGTTACCTATGGTGATATTTACCCTCTTGGAGTTAAGCAACAGGGGATATTGATTAATGGGCAGTTTCCCGGGCCACAAATCGACTCGGTTACTAATGATAATGTGATTGTTAGTATTTACAACAACTTGGATGAACCATTCCTTATTACATGGAATGGGATACAGCAAAGGAGAAATTCATGGCAAGATGGAGTTTACGGCACGAATTGCCCAATCCCACCTGGCCAAAACTTTACCTACATTCTTCAAGTCAAGGATCAAATTGGTAGTTTCTTCTACTTTCCGTCACTTGGGATGCACCGGGCTGCTGGAGGTTATGGTGGCATTACAATCTCCAGCCGCCCGAGGATCCCTGTCCCATTCCCTCCACCCGCAGGAGATTTCACTATTCTCGCGGGTGATTGGTTTAAGCAAAACCACACTGATTTGAAAGCAATTTTAGATGGAGGGCATGATCTTCCATTCCCTGATGGTCTCCTTATTAATGGTCGTGGATCTAACGGATTTACATTCAATGTTGATCAAGGGAAAACTTATAGGCTGAGGATATCGAACGTGGGACTTACTACATCAATCAACTTCAGGATCCAGGGACATAAGATGTTGCTAGTAGAGACTGAAGGAACTCATACTCTTCAAAACACATACTCTTCTCTCGATATTCATTTGGGCCAATCGTACTCGGTTTTGATCACTGCTGATCAACCACCGGCAAATTACTATATGGTTGTCTCAACTAGATTCACCTCTCAAGTCCTTAGTGCTACCTCCATTCTTCGATACAGCAATTCCGGGGGATCTTTCCCAGCTCCTCCACCTGGAGGCCCCACCATCCAAATCGACTGGTCTTTGAATCAAGCCCGGTCTGTTAGGCAAAACTTGACAGCAAGTGGACCAAGGCCAAACCCCCAAGGCTCATACCATTACGGTATGGTTAACTTCACTCGAACCATAAGGCTCGCGAACTCTGCTCCTATTATAAATGGCAAGCAGAGATACGCTGTCAACAGTGTGTCGTTTATACCAGCAGACACACCTCTAAAGATTGCCGATTATTTCAAGATCTCGGGTGTGTTTTCCCTTGGAACCATTTCCGACAGCCCCAATGGTGGTGGTGGTTACCTTCAAACTTCCGTCATGGCTGCTGATTTCCGAGCATTTGCTGAAATTGTTTTTGAGAATTCAGAAGATACCGTGCAATCTTGGCACATTGATGGACACTTTTTCTTTGTTGTCGGGATGGATGGAGGGCCGTGGTCCGAAGCTAGCAGAACAAGCTACAATTTAAGAGACGGGATATCCCGCTCTACAGTTCAAGTATACCCAAGATCATGGACAGCATTGTATGTACCACTAGACAATGTTGGCATGTGGAACATAAGATCTCAGAATTGGGCTAGACAATACTTAGGTCAACAATTTTACCTTCGAGTTTATTCACCAGTAAATTCATGGAGAGACGAGTACCCGATCCCAAAGAATGCCATTACTTGCGGCCGAGCAAGTGGTCGCAAGACACGTCCTTTGTAA | 1626 | 44.28 | MKQWSMKTTLLMLLAMLYTINGEDPYRFFDWNVTYGDIYPLGVKQQGILINGQFPGPQIDSVTNDNVIVSIYNNLDEPFLITWNGIQQRRNSWQDGVYGTNCPIPPGQNFTYILQVKDQIGSFFYFPSLGMHRAAGGYGGITISSRPRIPVPFPPPAGDFTILAGDWFKQNHTDLKAILDGGHDLPFPDGLLINGRGSNGFTFNVDQGKTYRLRISNVGLTTSINFRIQGHKMLLVETEGTHTLQNTYSSLDIHLGQSYSVLITADQPPANYYMVVSTRFTSQVLSATSILRYSNSGGSFPAPPPGGPTIQIDWSLNQARSVRQNLTASGPRPNPQGSYHYGMVNFTRTIRLANSAPIINGKQRYAVNSVSFIPADTPLKIADYFKISGVFSLGTISDSPNGGGGYLQTSVMAADFRAFAEIVFENSEDTVQSWHIDGHFFFVVGMDGGPWSEASRTSYNLRDGISRSTVQVYPRSWTALYVPLDNVGMWNIRSQNWARQYLGQQFYLRVYSPVNSWRDEYPIPKNAITCGRASGRKTRPL | 541 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aary5g02942 | 541 | CDD | CuRO-1-AAO-like-1 | 28 | 143 | IPR034273 | GO:0005507(InterPro) | |
| Aary5g02942 | 541 | SUPERFAMILY | Cupredoxins | 343 | 532 | IPR008972 | - | |
| Aary5g02942 | 541 | SUPERFAMILY | Cupredoxins | 153 | 333 | IPR008972 | - | |
| Aary5g02942 | 541 | FunFam | Monocopper oxidase-like protein | 157 | 331 | - | - | |
| Aary5g02942 | 541 | Pfam | Multicopper oxidase | 32 | 146 | IPR011707 | GO:0005507(InterPro) | |
| Aary5g02942 | 541 | Gene3D | - | 26 | 147 | IPR008972 | - | |
| Aary5g02942 | 541 | Pfam | Multicopper oxidase | 159 | 296 | IPR001117 | - | |
| Aary5g02942 | 541 | FunFam | Monocopper oxidase-like protein | 343 | 540 | - | - | |
| Aary5g02942 | 541 | SUPERFAMILY | Cupredoxins | 19 | 173 | IPR008972 | - | |
| Aary5g02942 | 541 | Gene3D | - | 342 | 538 | IPR008972 | - | |
| Aary5g02942 | 541 | Pfam | Multicopper oxidase | 376 | 513 | IPR011706 | GO:0005507(InterPro)|GO:0016491(InterPro) | |
| Aary5g02942 | 541 | Gene3D | - | 157 | 332 | IPR008972 | - | |
| Aary5g02942 | 541 | PANTHER | MULTI-COPPER OXIDASE | 27 | 507 | IPR045087 | GO:0016491(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aary5g02942 | K19791 | iron transport multicopper oxidase |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Aary | Aary-Chr17:146050916 | Aary5g02942 | Aary-Chr5:179692878 | dispersed | |
| Aary | Aary-Chr5:3052482 | Aary5g02942 | Aary-Chr5:179692878 | dispersed | |
| Aary | Aary-Chr5:178578529 | Aary5g02942 | Aary-Chr5:179692878 | dispersed | |
| Aary | Aary-Chr5:179692878 | Aary8g02670 | Aary-Chr8:184154074 | dispersed | |
| Aary | Aary-Chr13:209191183 | Aary5g02942 | Aary-Chr5:179692878 | wgd | |
| Aary | Aary-Chr13:8476128 | Aary5g02942 | Aary-Chr5:179692878 | wgd | |
| Aary | Aary-Chr13:3362300 | Aary5g02942 | Aary-Chr5:179692878 | wgd | |
| Aary | Aary-Chr5:179692878 | Aary9g02553 | Aary-Chr9:155151667 | wgd |