Gene detail

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Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aary5g02946	ATGGAGCTGAAAGATAAGATTAAAATAGTAGTTACAGTGTCCTGTGTTACAGTACTTGCAACAGTGATTAAAATCTTATTGGATAAAAGAGATCGAAGGCTAAAAGAGTTAAAGTGTTATTTGAAAACAGAGGAGAAATGTCAGCATAAGTTTAAGCGTGTCTTGGCTAATAATTCTTACGCGCCTTTTATGCATTTCAAGATTCATGACAATTCTACGGATTTGCATCCGTATGAATCGGAGATCAAGGCTCTGTTGGAGAAACCACAGCTAGATATTGAATTTTCTAATGGTAAGATGGGTGACATGAAGGATGCATATGTTTGGGTTGACGATGAAGTAAAGTTGAAACAGCTTGTTGAAGTATTGAGTAAAGAAAGAGTGTTTGCTGTGGATACTGAACAACATAGTTTACGTTCGTTCTTAGGGTTTACAGCTCTTATTCAGATTTCTACAAGTGATGAAGATTATTTGGTGGACACCATCGCTCTTCATGATGTTATGGGAATCCTCGGCCCCGTATTTGCCAATCCTAATATATGCAAGGTTTTTCATGGCGCTGATAACGATGTCATATGGTTACAAAGGGATTTTCATATCTATGTTGTAAACTTATTTGACACTGCCAAGGCATGTGACGTGTTATCGAAACCACAACGATCATTAGCATACTTACTAGAAACATATTGTGGTGTCATCACTAACAAGTTTTACCAGCGTGAAGATTGGAGACTACGTCCACTGCCAAAAGATATGCTTGAATATGCTCGGATGGATGCACACTATTTGTTGTATATTGCAGATTGTCTTGTTGCTGAGCTCAAACTCCAGAAAAATGAATATCCAGCCTGTCTCGATGACAACAAATTCGATTTTGTTTACGAGGCCAGCCGGCGTTCCAATGCTGTGAGTCTGCAACTATTCACTAAAGAACTAGAAGCTTCCCCGGGACAGTCTGCTGCTTCTTCAATTATTTCCAGGCACTTGAATGATCCTGGAAGCTCTACAAACAACAGTCAGTTTCAGGGTATCATCAGACGCCTATGCTGTTGGAGGGATTTCATGGCCCGCATGCATGATGAGAGCCTTAAATACGTATTATCCGATAATGCTATTGTCGCGCTTGCCGAAATAGTACCAGTAACCGAAACAGATATTTCCACTACAATATCACAAGCTGATACACATCTTGACTTTCTCAATTCAAATTCTACAACTCGTTCTCCATCGTCCGTAGTTTTAAGTCATTTGGTTGATTTCCATTTTCTTCTTCAAGGTGAATTACAGAATCCTGATGAAATACTACAAATCTATATCAAGAAGCATCTTGGGCCAAATGGTTCTTGTCCTTTATCTCTTTACAACTACGGCCTACTGTCGAAAAGCAATATTAAAGGGCCAAAGAGATTAGTTTCAAAAGAAAATGGATATAAATTTTCAAAACAGGTTGCTAGGAAGGCTTCTCGACAGCTTTTTGTTCAGAAGTTTTCCTGTAAATCGCCAGTTTATCACAATTGCAGGATATATGCTAATGATGGACGATTGTTATGTTACTGTGATCGAAGGAAGCTAGAATGGTATTTGAAGAGAGATCTGGCAAAACTTGTTGATGAAGATCCACCAGCCATAATGCTTCTCTTTGAACCTAAAGGCCGGCCAGAAGATGAAGGAAATGATTTTTATATACAGAGCAAGAAAAATATATGTGTAGGCTGTGGTGAAGGAAACCACTACTTACGCTACCGTATCATCCCATCATGTTATAGAATACACTTCCCTGAACATCTAAAAAGCCACCGCTCTCACGATATTGTTCTAGTTTGTGTCGATTGTCATGAAAAAGCACATTCTTTTGCTGAAAAGTATAAGAAGAAAGTCGCTTCGGACTATGGGATACCGTTATTTGTGCACAAAGTGGTTAATTCTAGTGAGGGAGATGGTGTTTCTGGAGGTTCTACGTCTGTCATGAAACTTGGTGATGGGGGTGTGTCTCCGTTAGAGTTGCGTACCGCTGCAATGGCTCTATTGAGGCATGGTCCAAGGATGCCGCCTCAACGCCGTGAGGAATTGACACAGATTGTCAGGAAGTATTATAGAGGACGAGAGATATCGGATGAAGACTTGGAAAATGCTTTCTATGTTGGAATGAGTCCTCACGAGAAAAGACGAATGCAGAAAAAGAGAGGCTCGTTTCTTAATAGTTCCTCAAAAAACATCGTCTCAGATACGGCGCTAAATACTGATATAGAAGATGTTGCAGACATGTCTATTAATGAAATTAATGAGCCTGAAAATGGTTCTATGTTGGATTCAGATATCAATTCTGAACCTACGGATGCATCTGCTAAACAAAATGGATCTGTAAACGTAAGTTCTGATGGTGGAGTAATTGCTACATGCGGTTCAAAATTATCGTTATTAGGGCATGGACCACATGGGAAGCAAGTTGTTGATTATCTGCTGAAGGAACATGGGGAAGATGGGATTCGTGAATTTTGTCAAAGATGGAGACAAGTGTTTGTTGAAGCTATCAATCCTCGATTTTTACCAGCTGGTTGGGATGTGACACATAGTGGTAGAAGAGAGTTTGGGGACTTCAGCGTATACAATCCTGCAAATAAGGGACCTCCTGCTGCTGGCTAA	2643	39.92	MELKDKIKIVVTVSCVTVLATVIKILLDKRDRRLKELKCYLKTEEKCQHKFKRVLANNSYAPFMHFKIHDNSTDLHPYESEIKALLEKPQLDIEFSNGKMGDMKDAYVWVDDEVKLKQLVEVLSKERVFAVDTEQHSLRSFLGFTALIQISTSDEDYLVDTIALHDVMGILGPVFANPNICKVFHGADNDVIWLQRDFHIYVVNLFDTAKACDVLSKPQRSLAYLLETYCGVITNKFYQREDWRLRPLPKDMLEYARMDAHYLLYIADCLVAELKLQKNEYPACLDDNKFDFVYEASRRSNAVSLQLFTKELEASPGQSAASSIISRHLNDPGSSTNNSQFQGIIRRLCCWRDFMARMHDESLKYVLSDNAIVALAEIVPVTETDISTTISQADTHLDFLNSNSTTRSPSSVVLSHLVDFHFLLQGELQNPDEILQIYIKKHLGPNGSCPLSLYNYGLLSKSNIKGPKRLVSKENGYKFSKQVARKASRQLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLKRDLAKLVDEDPPAIMLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLVCVDCHEKAHSFAEKYKKKVASDYGIPLFVHKVVNSSEGDGVSGGSTSVMKLGDGGVSPLELRTAAMALLRHGPRMPPQRREELTQIVRKYYRGREISDEDLENAFYVGMSPHEKRRMQKKRGSFLNSSSKNIVSDTALNTDIEDVADMSINEINEPENGSMLDSDINSEPTDASAKQNGSVNVSSDGGVIATCGSKLSLLGHGPHGKQVVDYLLKEHGEDGIREFCQRWRQVFVEAINPRFLPAGWDVTHSGRREFGDFSVYNPANKGPPAAG	880

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aary5g02946	880	SUPERFAMILY	HRDC-like	337	391	IPR010997	GO:0000166(InterPro)\|GO:0044237(InterPro)
	Aary5g02946	880	Pfam	3'-5' exonuclease	107	274	IPR002562	GO:0003676(InterPro)\|GO:0006139(InterPro)\|GO:0008408(InterPro)
	Aary5g02946	880	MobiDBLite	consensus disorder prediction	762	789	-	-
	Aary5g02946	880	SMART	35exoneu6	107	275	IPR002562	GO:0003676(InterPro)\|GO:0006139(InterPro)\|GO:0008408(InterPro)
	Aary5g02946	880	FunFam	Polynucleotidyl transferase ribonuclease H fold protein with HRDC domain	45	314	-	-
	Aary5g02946	880	ProSiteProfiles	HRDC domain profile.	338	427	IPR002121	GO:0003676(InterPro)
	Aary5g02946	880	CDD	Rrp6p-like-exo	103	298	IPR049559	-
	Aary5g02946	880	Pfam	HRDC domain	343	387	IPR002121	GO:0003676(InterPro)
	Aary5g02946	880	SUPERFAMILY	Ribonuclease H-like	47	278	IPR012337	-
	Aary5g02946	880	Gene3D	-	27	314	IPR036397	GO:0003676(InterPro)
	Aary5g02946	880	Gene3D	HRDC domain	332	433	IPR044876	-
	Aary5g02946	880	PANTHER	POLYMYOSITIS-SCLERODERMA AUTOANTIGEN-RELATED	39	873	IPR045092	GO:0000175(PANTHER)\|GO:0000175(InterPro)\|GO:0000176(PANTHER)\|GO:0000467(InterPro)\|GO:0000467(PANTHER)\|GO:0003727(PANTHER)\|GO:0005730(PANTHER)\|GO:0071035(PANTHER)\|GO:0071036(PANTHER)\|GO:0071037(PANTHER)\|GO:0071038(PANTHER)\|GO:0071039(PANTHER)\|GO:0071040(PANTHER)\|GO:0071044(PANTHER)\|GO:0071051(PANTHER)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aary5g02946	K12951	cobalt/nickel-transporting P-type ATPase D [EC:7.2.2.-]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	168226	Aary5g02946	Aary13g03483

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Aary	Aary-Chr1:160035309	Aary5g02946	Aary-Chr5:179999383	dispersed
	Aary	Aary-Chr5:179999383	Aary8g00834	Aary-Chr8:47489744	dispersed
	Aary	Aary-Chr10:263984783	Aary5g02946	Aary-Chr5:179999383	transposed
	Aary	Aary-Chr13:209609014	Aary5g02946	Aary-Chr5:179999383	wgd