AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aary5g03040 ATGAAAGACCCTCTTGAATCATTGCTAATAAATAAAAAAGGAAATGAAGCAGTGATAATTGGTGGTATGGTGTTGGATATACATGCTACCCCTTCTATTACTCCTGCCCCTAGAACTACTACTCCTGGCAAGGTGCGCTATGCAGCAGGAGGTGTAGCGAGGAACATAGCTGAGTGTGTATCAAAGCTTGGAACAAAACCTTTCATGATAAGTGCATTAGGATCGGACATGTCAGGGAATATGCTATTGGAGTACTGGAAGTCTGTCGGATTATCAACGCAAGGCATTAGAATGGGCCATGAGATAGAGACTCCAGTTGTATGCATTGTTTTTGATACTGAAGGAGAACCAGCTGCTGGTGTTGCAAGCGTCGAATCACTAGAACGATATCTTACACCACAGTGGATTCAACAATTTAAATCTAATATATCATCTGCTCCTATCGTGATGGTTGATGCAAATTTAAGCCAACCAGCTCTAGAAGCATCTTGTCAATTGGCAGCAGATGTTGGTACCCCGGTGTGGTTTGAGCCTGTATCGGTAGCAAAGGCGAGAAGAATTGTTTCAGTTGCGAAGTATGTAACCTTTGCTTCGCCTAACGAAGACGAGCTTATTGCAATGGCAAATGCTCTATCTGATAAAGACATTTTTTTTCCAGTTCAAAAAGATGGAATCTCAGTAACATCTTTATTTCAACAACTAAAACCCGCAATCTGGATTTTGCTTGAAAAAGGCATTAAAGTAGTTATTCTGACCCTCGGGTCAAAAGGGGTATTGTTATGTTCCAAACATCAACTCAGCTTTCAAAATATTGGCCCTAACAGAACCATTAAGTCGCATAATATTGGCCAAAAGTTACACGAAATAATGAATCAAGTCTGCCCATCGGACCGGTTTTTAAGTGGGCTTAAAGAAAGTTCTAGAAGCAGCCCGTTTGTTGTGCATTTTCCAGCTGTATTGTCTTCATCGGTTGTGAGGCTAACAGGAGCAGGTGATTGCTTGGTTGGTGGCTCGATTGCTTCTTTTTGTGTAGGGTTAGATCTAATGCAAAGTATTGCGGTTGGTATAGCAGCTGCTAAGGCTACTGTTGAGGTTGAGGCAAACGTGCCCACTGAATATAGCTTGGAGCAAATCACGGCCGATGCAAGAACGGTGTACTTGGGTGCCACAGTTGTTTTTAGTCAGTCGATGTTATAA 1197 42.11 MKDPLESLLINKKGNEAVIIGGMVLDIHATPSITPAPRTTTPGKVRYAAGGVARNIAECVSKLGTKPFMISALGSDMSGNMLLEYWKSVGLSTQGIRMGHEIETPVVCIVFDTEGEPAAGVASVESLERYLTPQWIQQFKSNISSAPIVMVDANLSQPALEASCQLAADVGTPVWFEPVSVAKARRIVSVAKYVTFASPNEDELIAMANALSDKDIFFPVQKDGISVTSLFQQLKPAIWILLEKGIKVVILTLGSKGVLLCSKHQLSFQNIGPNRTIKSHNIGQKLHEIMNQVCPSDRFLSGLKESSRSSPFVVHFPAVLSSSVVRLTGAGDCLVGGSIASFCVGLDLMQSIAVGIAAAKATVEVEANVPTEYSLEQITADARTVYLGATVVFSQSML 398
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aary5g03040 398 CDD YeiC-kinase-like 18 364 - -
Aary5g03040 398 SUPERFAMILY Ribokinase-like 17 369 IPR029056 -
Aary5g03040 398 PANTHER ZGC:136858 28 381 - -
Aary5g03040 398 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 50 74 IPR002173 GO:0016301(InterPro)
Aary5g03040 398 PRINTS Ribokinase signature 249 260 IPR002139 GO:0016301(InterPro)
Aary5g03040 398 PRINTS Ribokinase signature 189 204 IPR002139 GO:0016301(InterPro)
Aary5g03040 398 PRINTS Ribokinase signature 19 40 IPR002139 GO:0016301(InterPro)
Aary5g03040 398 Pfam pfkB family carbohydrate kinase 17 269 IPR011611 -
Aary5g03040 398 Gene3D - 11 387 IPR029056 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aary5g03040 - -