AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aary5g03054 ATGGATGATGAATCAGAAGTAGGCAAGCGAATAACAGTTGGCGTGGGTCCCACCTCTGTTTTGGAATACCTTGATCCTAAGAGCACAAGGTGCAAAAATGATAGGTTTACTTCTGAGGATCATTATGAGTGGCTTAAAGATTACTCCCATTTTCGTCATCTTATTCACCAACATATCAAACCTGAATTTTCTGTATTGGAGCTAGGGTGTGGGAACTCACAACTGTGTGACAAGCTATATAAAGATGGAATTACTGATTTAACCTCCATTGATCTATCTTCAGTTGCAGTTGCCAAAATGCAGAAACGACTGTTATCGAAAGGCCTTAAAGATATTAAAGTTATGGAAGACGACATGCTGAATCTTTCCTTTACTGATGAATCGTTTGATGTAGTTATAGAGAAAGGAACTATGGATGTTTTGTTCGTGGACAGTGGTGACCCTTGGAACCCCCGGCCAGAGGTTGTAAACAAGGCAATGGCAATGCTTCAAGGTGTTCATAGGGTTTTAAAACCTAACGGGATTTTTATCTCAATCGCTTTTTGTCAGCCACACTTTAGGCGTCCATTATTTAATGCTCCTGAGTTTACATGGTCAATGGAGTATTCTACATTTGGTGATGGATTCCACTACTTCTTTTATATTCTGAGGAAGGGATACAGATCACTAGACTCCGATGCGGATATGAATAAAGTTGGGACACCATCTATATGCCTTTATCAAGATGAATTAGATAATGAAGATTACTTATTCCGCACCAACATTGATGAAATGGACGATGAAAGATAG 789 39.29 MDDESEVGKRITVGVGPTSVLEYLDPKSTRCKNDRFTSEDHYEWLKDYSHFRHLIHQHIKPEFSVLELGCGNSQLCDKLYKDGITDLTSIDLSSVAVAKMQKRLLSKGLKDIKVMEDDMLNLSFTDESFDVVIEKGTMDVLFVDSGDPWNPRPEVVNKAMAMLQGVHRVLKPNGIFISIAFCQPHFRRPLFNAPEFTWSMEYSTFGDGFHYFFYILRKGYRSLDSDADMNKVGTPSICLYQDELDNEDYLFRTNIDEMDDER 262
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aary5g03054 262 CDD AdoMet-MTases 65 181 - -
Aary5g03054 262 Gene3D Vaccinia Virus protein VP39 28 232 IPR029063 -
Aary5g03054 262 Pfam Methyltransferase domain 60 182 IPR025714 -
Aary5g03054 262 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 40 214 IPR029063 -
Aary5g03054 262 FunFam EEF1A lysine methyltransferase 4 23 234 - -
Aary5g03054 262 PANTHER SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN 32 219 IPR051419 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aary5g03054 K22857 EEF1A lysine methyltransferase 4 [EC:2.1.1.-]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aary Aary-Chr5:186216609 Aary5g03110 Aary-Chr5:189003640 dispersed