Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aary7g02336 | ATGGATAACACACCACTTTTCTTCACAATGTTTTTCACAATATATTTATCAGCACATTTCATCGTTTTCCGTAACTGGAGTCCGAAAACCAGACCAGAAGCCGCGAGCTGCCTTATCTCACTTGCACATGGCACACCCGCGGTCTTTCTTGCAATGCACGTAATCCTTTTTGACCCCAAAACACATACATTCGCGTCACAAAATAATATTTCACAAAACAATGTTCTTGAATATAGCATTGCATATTTCATTATGGACTTATGTCACTTGTTAATATTTGACCCAAAGGATGTACTTTTTATTTTTCACCATTTAGCTACACTTTTTGTTTTTGTCACGTGTCGATATTTAGTTTTTCACGGCGCGTATGGAGTTTTGGTTTTGCTAGTTTTAGCTGAGGTTACGAGTTTCTTACAAAATGTTTGGACTTTAGCTAGTGCGCAAAAGGAGGAAAATGAAGTTGCGGCGAGAGTGTTTTATAAGATATCTGTTCCCTTTTATTCATTGTATTCTGTTGTTAGAGGGTTTCTTGGGCCTTTGTTTGTTTATGAGATGGTTCTGTTTTATTCTAGTGGCGTGGCGGATAATGTTGTTCCTAAGTGGGTTTGGGTTTCTTGGATTTGTGTTGTGGTTATGGCGATTTCGGTTAGTATACTATGGGTGACTAATAATTGGGTCGCGCTGTATAGGGAAAGAATGTTTAAGGTTGAGAACGAGAAGAAGGTTAGTTAG | 732 | 38.39 | MDNTPLFFTMFFTIYLSAHFIVFRNWSPKTRPEAASCLISLAHGTPAVFLAMHVILFDPKTHTFASQNNISQNNVLEYSIAYFIMDLCHLLIFDPKDVLFIFHHLATLFVFVTCRYLVFHGAYGVLVLLVLAEVTSFLQNVWTLASAQKEENEVAARVFYKISVPFYSLYSVVRGFLGPLFVYEMVLFYSSGVADNVVPKWVWVSWICVVVMAISVSILWVTNNWVALYRERMFKVENEKKVS | 243 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aary7g02336 | 243 | ProSiteProfiles | TLC domain profile. | 29 | 238 | IPR006634 | GO:0016020(InterPro) | |
| Aary7g02336 | 243 | SMART | lag1-27 | 29 | 233 | IPR006634 | GO:0016020(InterPro) | |
| Aary7g02336 | 243 | Pfam | TLC domain | 35 | 222 | IPR006634 | GO:0016020(InterPro) | |
| Aary7g02336 | 243 | PANTHER | GLABROUS1 ENHANCER-BINDING PROTEIN-LIKE 2 | 3 | 238 | IPR040327 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aary7g02336 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 5296 | Aary11g02047 | Aary7g02336 | |
| 9540 | Aary3g01756 | Aary7g02336 | |
| 171440 | Aary15g02236 | Aary7g02336 | |
| 179439 | Aary7g02336 | Aary15g02236 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Aary | Aary-Chr7:200868851 | Aary7g02336 | Aary-Chr7:200890800 | proximal | |
| Aary | Aary-Chr7:200890800 | Aary7g02339 | Aary-Chr7:200961078 | proximal |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Aary3g01756 | ACH,AST | 330 | 572 | GeBP Transcription Factor family | AT5G14280 | 64.198 | 9.99e-105 | 312.0 | |
| Aary5g00173 | . | 66 | 368 | GeBP Transcription Factor family | AT1G61730 | 28.701 | 8.68e-23 | 96.3 | |
| Aary6g01690 | ACH,AST | 120 | 370 | GeBP Transcription Factor family | AT1G61730 | 29.183 | 3.12e-24 | 98.6 | |
| Aary7g02333 | . | 330 | 571 | GeBP Transcription Factor family | AT5G14280 | 56.79 | 2.36e-94 | 286.0 | |
| Aary7g02336 | ACH,AST | 330 | 571 | GeBP Transcription Factor family | AT5G14280 | 56.79 | 2.36e-94 | 286.0 | |
| Aary7g02339 | . | 330 | 571 | GeBP Transcription Factor family | AT5G14280 | 58.436 | 1.01e-95 | 289.0 | |
| Aary10g01432 | . | 34 | 423 | GeBP Transcription Factor family | AT5G28040 | 41.266 | 5.37e-77 | 242.0 | |
| Aary10g01441 | . | 79 | 423 | GeBP Transcription Factor family | AT5G28040 | 44.318 | 3.40e-80 | 251.0 | |
| Aary10g02155 | . | 70 | 368 | GeBP Transcription Factor family | AT4G25210 | 31.908 | 2.07e-26 | 105.0 | |
| Aary11g02047 | ACH,AST | 330 | 572 | GeBP Transcription Factor family | AT5G14280 | 65.021 | 1.09e-105 | 315.0 | |
| Aary13g00283 | ACH | 95 | 365 | GeBP Transcription Factor family | AT4G25210 | 29.091 | 1.20e-22 | 95.1 | |
| Aary13g00543 | ACH | 66 | 368 | GeBP Transcription Factor family | AT1G61730 | 28.28 | 2.64e-23 | 97.8 | |
| Aary14g01966 | ACH,AST | 120 | 370 | GeBP Transcription Factor family | AT1G61730 | 29.183 | 3.63e-24 | 98.6 | |
| Aary15g02236 | ACH,AST | 330 | 571 | GeBP Transcription Factor family | AT5G14280 | 58.436 | 2.21e-96 | 291.0 |