AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aary7g02345 ATGGCAGACTATCACTTTGTGTACAAGGACGTTGAAGGAGCATCAACACAATGGGATGATATTCAGAGAAAGCTCGGAAATTTGCCTCCGAAAGCCCCTGTATTCAAACCCGACCCGTTTACTCCTGCAGAAGATGAAGATTCCAGACCGAAAGACAAGAATTGGATCGATCACAAGACTGAAGAGGAACTCGAAGATCTAGAGGATGATCTGGATGATGATCGCTTCCTCCAAGAATACAGGAGAAAGAGGTTAGCAGAGATGAAGCAAGTTGTGAAAATTGCTAAGTTTGGGTCAATCATACCGATTTCTGGATCAGATTTTGTGCGTGAGGTATCACAAGCTCCATCAGATGTTTGGGTGGTTGTTATTTTGTACAAAGATGGGTACCCTGAATGTGGAGTGCTAATGCAATGTATGGAAGAACTGGCAACGATGTATTCTGCAACAAAGTTTGTTAAAATTATATCGACGGATTGTATTCCTAATTATCCAGATCAGAATCTCCCAACGGTATTGGTATACAATAATGGTGCTGTCAAGGCAAATTATGCCGGTTTACATACTTTTGGTCGAAGATGCACTCCAGAAGGTGTTGCTCTGATCTTGTGCCAGTCAGACCCTGTTCTTAATGATGGCCAGACTGATGGTGAAGCTTCTAGGGATGCTGTCCTTGAAGGAGTAAGGAGGAGGTTTATCGAGAAAGTGGTAACACAGCATGAAAATGATGATGACGGGTCTTCGAGTGACTAG 753 43.03 MADYHFVYKDVEGASTQWDDIQRKLGNLPPKAPVFKPDPFTPAEDEDSRPKDKNWIDHKTEEELEDLEDDLDDDRFLQEYRRKRLAEMKQVVKIAKFGSIIPISGSDFVREVSQAPSDVWVVVILYKDGYPECGVLMQCMEELATMYSATKFVKIISTDCIPNYPDQNLPTVLVYNNGAVKANYAGLHTFGRRCTPEGVALILCQSDPVLNDGQTDGEASRDAVLEGVRRRFIEKVVTQHENDDDGSSSD 250
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aary7g02345 250 PANTHER VIRAL IAP-ASSOCIATED FACTOR HOMOLOG 5 247 IPR051498 GO:0005737(PANTHER)|GO:0006457(PANTHER)
Aary7g02345 250 Gene3D Glutaredoxin 91 220 - -
Aary7g02345 250 MobiDBLite consensus disorder prediction 27 57 - -
Aary7g02345 250 CDD Phd-like-VIAF 16 206 - -
Aary7g02345 250 MobiDBLite consensus disorder prediction 40 57 - -
Aary7g02345 250 SUPERFAMILY Thioredoxin-like 16 205 IPR036249 -
Aary7g02345 250 Pfam Phosducin 55 184 IPR024253 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aary7g02345 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
171442 Aary15g02240 Aary7g02345
179441 Aary7g02345 Aary15g02240
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aary Aary-Chr6:132185515 Aary7g02345 Aary-Chr7:201800461 transposed
Aary Aary-Chr15:173055837 Aary7g02345 Aary-Chr7:201800461 wgd