AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aary7g02359 ATGCCTTCATTAATCCCAGAAGAACCACTTTTAACCCCAACCCAAGACAGATTCTGCATGTTCCCTATTCACCACCCTCAAATATGGGAAATGTACAAAAAAGCCCAAGCTTCATTCTGGACAGCAGAAGAAGTGGACTTATCATCAGATATCCGTCACTGGGAGTCGTTAACTAACGGAGAACGTCATTTCATTACACACGTTCTAGCGTTTTTCGCCTCTTCTGACGGCATTGTGTTGGAGAATTTGGCTGGTAGGTTTATGGGTGATGTCCAAGTAGCCGAAGCGAGGGCTTTTTACGGGTTTCAAATTGCGATAGAGAATATACATTCGGAGATGTATAGTTTGCTTTTGGAAACGTATGTGAAGGATGGGAAGGAGAAAGATAGGTTGTTTAAGGCTGTTGAGACGATTCCGTGTGTTGAGAAAAAGGCGAAGTGGGCGATGAGGTGGATTGATGGCTCGGAGTCGTTTGCTGAAAGGATTATTGCGTTTGCGTGTGTTGAAGGTAGAAAAAGATACTTTTGCGCGATATTTTGGCTTAAAAAGCGCGGCTTAATGCCAGGACTAACCTTCTCAAACGAGTTAATCTCACGAGACGAAGGCCTCCACTGCGATTTCGCGTGCCTACTCTACACTTTACTAAACAACAAACTAACTGAAGAGCGCGTAAAGTCCATAGTATCTGATGCAGTTGATATCGAACGTGAGTTTGTTTGTGACGCATTGCCATGTGCACTAGTTGGCATGAATGGTGAACTTATGAGTACATATATCGAGTTTGTGGCTGATAGGTTGTTGGTGTCCTTAGGATTTAGCAAAATGTATAATGTTTCGAACCCGTTTGATTGGATGGAATTGATTTCGTTACAAGGGAAGACGAATTTTTTCGAGAAGCGAGTAGGGGAGTATCAAAAGGCTTCGATTATGTCGAATTTGAATGGAAATGGTGCTGATCAACATGTGTTCAAGATGGATGAAGATTTTTGA 990 42.53 MPSLIPEEPLLTPTQDRFCMFPIHHPQIWEMYKKAQASFWTAEEVDLSSDIRHWESLTNGERHFITHVLAFFASSDGIVLENLAGRFMGDVQVAEARAFYGFQIAIENIHSEMYSLLLETYVKDGKEKDRLFKAVETIPCVEKKAKWAMRWIDGSESFAERIIAFACVEGRKRYFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYTLLNNKLTEERVKSIVSDAVDIEREFVCDALPCALVGMNGELMSTYIEFVADRLLVSLGFSKMYNVSNPFDWMELISLQGKTNFFEKRVGEYQKASIMSNLNGNGADQHVFKMDEDF 329
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aary7g02359 329 PANTHER RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN 8 329 IPR000358 GO:0009263(InterPro)
Aary7g02359 329 Pfam Ribonucleotide reductase, small chain 17 281 IPR000358 GO:0009263(InterPro)
Aary7g02359 329 Gene3D Ribonucleotide Reductase, subunit A 4 306 IPR012348 GO:0016491(InterPro)
Aary7g02359 329 ProSitePatterns Ribonucleotide reductase small subunit signature. 106 122 IPR030475 -
Aary7g02359 329 SUPERFAMILY Ferritin-like 6 306 IPR009078 -
Aary7g02359 329 CDD RNRR2 18 290 IPR033909 GO:0009263(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aary7g02359 K00526 ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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Event-related genes

Select Gene_1 Gene_2 Event_name
4191 Aary10g04311 Aary7g02359
171452 Aary15g02252 Aary7g02359
179451 Aary7g02359 Aary15g02252
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aary Aary-Chr2:150464122 Aary7g02359 Aary-Chr7:202573507 dispersed
Aary Aary-Chr10:243810909 Aary7g02359 Aary-Chr7:202573507 wgd
Aary Aary-Chr15:173848093 Aary7g02359 Aary-Chr7:202573507 wgd