AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aary9g00838 ATGGGTTATCTCGATTTTCGGTTTTTGGTCACTTTTGCAACAGAGGGAGTCAGTTCCGATTTAAAGATGTATGTAGTGGACAGCAAAGGTGGAGCGATAACATGTATGCTGCTAGCGCTCTTTTTTCTAGGAACATGGCCCGCCATTCTAACATTGTTAGAAAGACGTGGCCGGCTTCCTCAACATACATATGTTGATTACACAATTACCAATCTCCTGGCTGCTGTCATAATTGCTTTTACACTTGGGGAATTTGGACATTCCAGTGATGATACACCCAACTTCCTAGTCCAGCTGTCACAGAATAATTGGCCAAGCGTTCTATTTGCAATGGCGGGCGGAGTGGTTTTAAGCCTCGGTACAACTTTGAATTACTTTTTAGATGGAAAAATCAACAGGGCCGAGATACTTTTCCCAGGTGTTGCGTGTTTCCTGATTGCTGTTTGTTTTGGTTCCTTGTTGCATACATCAAACGCCAAAGATAATCAAGAAAAGCTTGATAGATTAGAAAGTCCTCACACAAGTGGAAAAGGGTACATCTTCTTTCTTTGA 552 42.03 MGYLDFRFLVTFATEGVSSDLKMYVVDSKGGAITCMLLALFFLGTWPAILTLLERRGRLPQHTYVDYTITNLLAAVIIAFTLGEFGHSSDDTPNFLVQLSQNNWPSVLFAMAGGVVLSLGTTLNYFLDGKINRAEILFPGVACFLIAVCFGSLLHTSNAKDNQEKLDRLESPHTSGKGYIFFL 183
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aary9g00838 183 Pfam Ureide permease 63 121 IPR009834 GO:0016020(InterPro)|GO:0071705(InterPro)
Aary9g00838 183 PANTHER UREIDE PERMEASE 1-RELATED-RELATED 119 171 IPR030189 GO:0005274(PANTHER)|GO:0015505(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0071705(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aary9g00838 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Aary Aary-Chr9:83655789 Aary9g00840 Aary-Chr9:83667859 proximal
Aary Aary-Chr9:83648862 Aary9g00838 Aary-Chr9:83655789 tandem