Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amtr01g04234 | ATGGCTGAAAATATAATACAGAGGTTAGAGGCAGCCGTAACGCGTCTCGAAATCTTTTCCAACCGTTCTAGGCCACAAGCTGCCACAACACTCGACGCCACATCAGCCATATCTGAACCGTCGATCGTCGCATTCGACGATCTGATCACCGAATATGTCGATAAGGTCTCCGGTTCAGCGGATAAGATCGGCGGACAGGTTAAGGATATTACGAGTATTCTTAAAGAAGCGTTTTCTGCACAGAAGGAGCTTCTTGTTCAAATCAAACAAACTCAGCAACCTGATGCTGCAGGAATGGCGGAATTTTTCAGACCATTAAATGAAAAACTAAGTGAAGCAACTAGAATGACAGAAGGACCCCGTTCTGATTTCTTCAACCACTTAAAATCTGTTGCTGAAAGTCTGACCGCTTTAGCATGGATTGCATATGCAGGGAAAAATTGCGGAATGAGCATGCCTATTGGACATGTTGAAGAATGTTGGCAGTCAGCTGAGTTTTACAATAACAAGGTTCTTGTAGAATACAGAAATAAAGATTCAAGTCATGTGGAATGGGCAAAAGCTCTCAAGGAACTTTATGTACCAGGCTTAAGGGATTATGTAAAGAGTCACTATCCTTTGGGACCCGTATGGAGTGCAACCGGGGTAACTGTATCTGCTCCATCAAAGTCCTCTACACCAGGTGCTCCTGCTGCTCCAAATCCCCCGCCAGCTTCGCTTGCCAGTTCATCATCTTCTTCATCATCTTCATCCCGTCCACAACAAGGAATGTCTGCAGTTTTTCAAGAAATTAGTTCAAAGCCCGTTACTGCTGGATTAAGAAAAGTTACAGATGACATGAAGACGAAAAACCGCACAGATAGAGCAGGATTTGTGAGTTCTGGAGAAAAAGAACCCCGCAAGAGTGTGCCACCAGCTGCTAAAGTTGGTCCTCCAAAACTTGAGCTCGTAATGGGTCGCAAATGGGTTGTTGAGAATCAAATTGGTGTGAAAGATTTGTCTATTGATGAGTGTGATCCAAGGCAGACAGTTTATATTTATGGATGCAAAGATTCAGTTCTTCAGATAAAAGGGAAAGTTAACAACATAACTGTTGACAAATGCACAAAAATGGGTGTTATATTTACGGACGTTGTAGCTGCTTTTGAGATTGTTAATTGCAGCAGCCTTGAGGTGCAATGCCAGGGTTCAGCCCCTACCATTTCAATAGACAACACAGCAGGTTGTCAGCTGTACTTGAGCAAAGATTCTCTAGAATCTTCTATCACAACTTCCAAGGCAAGTGAAGTTAATGTGATGGTACCTGCCCAAGATCCTGATGCGGATATGGTCGAACATCCTATGCCACATCAGTACATTCACACTTACCAAGATGGCCACTTTGTTACAACCCCCGTCTCTCACTCTGGAGCGTAA | 1416 | 43.64 | MAENIIQRLEAAVTRLEIFSNRSRPQAATTLDATSAISEPSIVAFDDLITEYVDKVSGSADKIGGQVKDITSILKEAFSAQKELLVQIKQTQQPDAAGMAEFFRPLNEKLSEATRMTEGPRSDFFNHLKSVAESLTALAWIAYAGKNCGMSMPIGHVEECWQSAEFYNNKVLVEYRNKDSSHVEWAKALKELYVPGLRDYVKSHYPLGPVWSATGVTVSAPSKSSTPGAPAAPNPPPASLASSSSSSSSSSRPQQGMSAVFQEISSKPVTAGLRKVTDDMKTKNRTDRAGFVSSGEKEPRKSVPPAAKVGPPKLELVMGRKWVVENQIGVKDLSIDECDPRQTVYIYGCKDSVLQIKGKVNNITVDKCTKMGVIFTDVVAAFEIVNCSSLEVQCQGSAPTISIDNTAGCQLYLSKDSLESSITTSKASEVNVMVPAQDPDADMVEHPMPHQYIHTYQDGHFVTTPVSHSGA | 471 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amtr01g04234 | 471 | SUPERFAMILY | C-terminal domain of adenylylcyclase associated protein | 311 | 470 | IPR036223 | - | |
| Amtr01g04234 | 471 | ProSiteProfiles | C-CAP-cofactor C-like domain profile. | 311 | 448 | IPR017901 | - | |
| Amtr01g04234 | 471 | MobiDBLite | consensus disorder prediction | 238 | 258 | - | - | |
| Amtr01g04234 | 471 | FunFam | Adenylyl cyclase-associated protein | 41 | 216 | - | - | |
| Amtr01g04234 | 471 | MobiDBLite | consensus disorder prediction | 217 | 258 | - | - | |
| Amtr01g04234 | 471 | MobiDBLite | consensus disorder prediction | 272 | 309 | - | - | |
| Amtr01g04234 | 471 | MobiDBLite | consensus disorder prediction | 274 | 295 | - | - | |
| Amtr01g04234 | 471 | Gene3D | - | 310 | 470 | IPR016098 | - | |
| Amtr01g04234 | 471 | SUPERFAMILY | N-terminal domain of adenylylcyclase associated protein, CAP | 41 | 236 | IPR036222 | - | |
| Amtr01g04234 | 471 | Gene3D | - | 41 | 216 | IPR036222 | - | |
| Amtr01g04234 | 471 | ProSitePatterns | CAP protein signature 1. | 5 | 17 | IPR018106 | - | |
| Amtr01g04234 | 471 | SMART | carp | 387 | 424 | IPR006599 | - | |
| Amtr01g04234 | 471 | SMART | carp | 349 | 386 | IPR006599 | - | |
| Amtr01g04234 | 471 | FunFam | Adenylyl cyclase-associated protein | 310 | 470 | - | - | |
| Amtr01g04234 | 471 | Pfam | CAP, N-terminal domain | 45 | 207 | IPR053950 | - | |
| Amtr01g04234 | 471 | Pfam | Adenylate cyclase associated (CAP) C terminal | 311 | 468 | IPR013912 | GO:0003779(InterPro)|GO:0007010(InterPro) | |
| Amtr01g04234 | 471 | Pfam | CAP N-terminal conserved motif | 3 | 17 | IPR013992 | GO:0003779(InterPro)|GO:0007010(InterPro) | |
| Amtr01g04234 | 471 | PANTHER | ADENYLYL CYCLASE-ASSOCIATED PROTEIN | 3 | 469 | IPR001837 | GO:0003779(PANTHER)|GO:0003779(InterPro)|GO:0005737(PANTHER)|GO:0007010(InterPro)|GO:0007015(PANTHER)|GO:0008179(PANTHER)|GO:0019933(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amtr01g04234 | K17261 | adenylyl cyclase-associated protein |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 10391 | Amtr01g04234 | Amtr02g02804 | |
| 358174 | Amtr01g04234 | Amtr06g04312 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Amtr | Amtr-Chr1:114133265 | Amtr02g02804 | Amtr-Chr2:62789395 | wgd | |
| Amtr | Amtr-Chr1:114133265 | Amtr06g04312 | Amtr-Chr6:95677170 | wgd |