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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amtr01g04238	ATGATACGAGCGGTTATAGTAATAAACGATCAAGGCAAGCCTCGCCTCGTCAAATTCTACGACTATCAGCCTGTGGAGAAACAACAGGAAATCATCCGTAATATATACGCAGTCCTCTGCAGTAGAGCTGAGAATGTGAGCAACTTTGTTCAGGATTCAACTTTTGGACCGGATACCCGACTTGCATACAAGACTTTTGCTACACTATACTTCATTGTCATATTTGATGATTCTGAAAATGAACTTGCTATACTAGATCTAATGCAAGTGTTCGTGGAGACGTTGGACAAGTGTTTCAGTAATGTGTGTGAGCTCGATATCGTGTTCAATTTCAACAAGGTACATACCATCCTTGATGAGATTATTTTGGGTGGTCAAGTTGTGGAAATGAGTTCTTCTGAAGTTGTCAAAGCGGTTGACGAAATTTCTTGGCTGGAGAAAAACCCAAACTCAACCGCGAGAGTTCCAAAATCCATATCCGGTTGGCAGGGACGATAA	498	41.57	MIRAVIVINDQGKPRLVKFYDYQPVEKQQEIIRNIYAVLCSRAENVSNFVQDSTFGPDTRLAYKTFATLYFIVIFDDSENELAILDLMQVFVETLDKCFSNVCELDIVFNFNKVHTILDEIILGGQVVEMSSSEVVKAVDEISWLEKNPNSTARVPKSISGWQGR	165

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amtr01g04238	165	CDD	AP3-sigma	1	143	IPR027155	GO:0006896(InterPro)\|GO:0030123(InterPro)
	Amtr01g04238	165	Gene3D	-	1	159	-	-
	Amtr01g04238	165	PANTHER	ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY	2	143	IPR016635	GO:0015031(InterPro)\|GO:0016192(PANTHER)\|GO:0043231(PANTHER)
	Amtr01g04238	165	SUPERFAMILY	SNARE-like	1	143	IPR011012	-
	Amtr01g04238	165	FunFam	AP complex subunit sigma	1	155	-	-
	Amtr01g04238	165	Pfam	Clathrin adaptor complex small chain	1	142	IPR022775	-
	Amtr01g04238	165	PIRSF	AP-complex-sigma	1	155	IPR016635	GO:0015031(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amtr01g04238	K12399	AP-3 complex subunit sigma

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Amtr	Amtr-Chr1:114281591	Amtr03g03233	Amtr-Chr3:67161666	dispersed
	Amtr	Amtr-Chr1:114281591	Amtr01g00548	Amtr-Chr1:17328285	transposed