Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amtr01g04303	ATGGGGTCTGCTTGTTGTGTTGCTGCTAAAGATAGAACTATAACAGATCGATCTAGTAACGATGTTGTTACAAGAAATGATCGGTATTCGCCATCATGGAGCTTTAGGTGGGATAACCGGGGGCGTGTTGCAGGTGAAGAGTCATCCATTAACGACAGGTTGGACAATAAATCTCATACAACTGTAGAAACCGCCTATGCAACAGAAGGCAGTCCATTAGACAGTTCTAGAAGTCTGGGGTGGCAAAAATCACCACCTTCTGAAGAAATTGGGCTTCCTCAATTAGATATGTTGAATTCCAAGAATCTTCATGAGGTGAAAGATTCAAGGGGAACCCAAACTCCAGTAGCCTTGGAACTCTCTCCAACCATCATGTTAACCCCAGCACATTCAATTTCATCCTTGTCAGCATCTCCTTTGTCTTCTTCCCGAAGTCAGCTCATGCCCATGTCAAGTTTGACACCATCAAGATGGTCCCGTCGTTCGCCAGGTCACCACCATCTACTCCGTCAAATATCAGATAGCCGAATTCGAGGCATGATGTCACCAAATTTTTCAATATCTGAAGATGGTTCTCCTTTTATGCGCCATCCCGGGTTGACCAATAAGTCAAACATTGGGTCTCATGGTGGGTCTTCAGATGGTTGGTCTAATAGAGATAGATGGTCTTTTGACAGTGATGCTATGAGCTTTAGTCGTGATAGATTTAGCCGTTCTAGTGTCAGGGTTTCTTCCTCTCCAACTGTTGAGATTATGACATGTGGCATCTGCTCCAAGCTTTTAACCGAACGGTCCTCTTGGAGCAGCCATAAAATCATGGCTACTAATGGGCTTCCCATTGTTTCTGTCCTGATATGTGGGCATGTTTATCATGCTGAGTGTTTGGAAAATATGACATCTGAGATCAATAAGTATGACCCGGCATGTCCTGTTTGTACTTTGGGAGAAAAAAAGGTTATTAAGATGTCAAGTGAAATGGATTTCAAGGGTAAAATCGGAAAGAAATTAAATCGCCGGTTGGTTGATGGTGGCAATTCTGTTATTTTTAATCAGTTTACAAATGGCAGGGGTCCCATGATGGGGTCAAGTTCCAGCATGAAAAGCTCTACAAGTACAGGGAAACCGTTTTTGAGGAGACATTTTTCTTTCGGCTACAAACCGAATAGATCTTTATCAGACAACGGTTTTAGAAAAAAGAGATTTTTCTGGTCAAAATCAAGCAAGGAGTGA	1230	42.6	MGSACCVAAKDRTITDRSSNDVVTRNDRYSPSWSFRWDNRGRVAGEESSINDRLDNKSHTTVETAYATEGSPLDSSRSLGWQKSPPSEEIGLPQLDMLNSKNLHEVKDSRGTQTPVALELSPTIMLTPAHSISSLSASPLSSSRSQLMPMSSLTPSRWSRRSPGHHHLLRQISDSRIRGMMSPNFSISEDGSPFMRHPGLTNKSNIGSHGGSSDGWSNRDRWSFDSDAMSFSRDRFSRSSVRVSSSPTVEIMTCGICSKLLTERSSWSSHKIMATNGLPIVSVLICGHVYHAECLENMTSEINKYDPACPVCTLGEKKVIKMSSEMDFKGKIGKKLNRRLVDGGNSVIFNQFTNGRGPMMGSSSSMKSSTSTGKPFLRRHFSFGYKPNRSLSDNGFRKKRFFWSKSSKE	409

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amtr01g04303	409	MobiDBLite	consensus disorder prediction	137	159	-	-
	Amtr01g04303	409	MobiDBLite	consensus disorder prediction	137	164	-	-
	Amtr01g04303	409	ProSiteProfiles	Zinc finger RING-type profile.	254	313	IPR001841	-
	Amtr01g04303	409	SUPERFAMILY	RING-U-box	248	313	-	-
	Amtr01g04303	409	Gene3D	Zinc-RING finger domain, C3HC4 (zinc finger)	237	314	IPR013083	-
	Amtr01g04303	409	PANTHER	EXPRESSED PROTEIN	1	318	-	-
	Amtr01g04303	409	MobiDBLite	consensus disorder prediction	68	83	-	-
	Amtr01g04303	409	MobiDBLite	consensus disorder prediction	68	88	-	-
	Amtr01g04303	409	SMART	ring-2	254	312	IPR001841	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amtr01g04303	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	10400	Amtr01g04303	Amtr02g02781

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Amtr	Amtr-Chr1:73588418	Amtr01g04303	Amtr-Chr1:116148480	dispersed
	Amtr	Amtr-Chr1:116148480	Amtr02g02781	Amtr-Chr2:62272038	dispersed