Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amtr01g04322	ATGAGTGAAATAAGCAGAAAAATGAGGAGAATAAACCTAAAGAGAACACTCATATGGCGTGTAACTCTTCTCCGGCGAAGTGTTCGATCTTTATGGCACCAAATTATTGTATGTTGGATCGGTAAATCAATCAGATACCGACAACAGTTAACTTCCGGTGCCGGTCCATTAATTCCGACGTGTCACCGGCGTTCTGTTCCGGTGGAGAGGACAACTACGGTTGATATGGCCACCGTATGCCACCAGGGTCCGTCGAGAGAAATGTCGGCATGTGGCGGTGACGGTTTGGCTGTTTCCGGTGATGCCACGTCATCATTTGGTGGATATGATCGTGATCAAGATGGGTCTGATTTGGTGGCTTTGAAGATATGTGTGTTGGGTGATGAACAAATTGGCAAAACAAGTTTCTTGGCCAAGTATGTTGGTAAAGAAAAGAATAATGAAGCTAAAGGAATAAGTCATATGGATAAAACACTACGTATTGGAGGAGCTAGAATTTCCTACAGCATCTGGGAAGTGGGTGGGGACACTAATTTATACCCAGACGGTGATTCTATGAATATGATTCCTAGAGCTTGTAAGGACTCCGTAGCTATATTCTTCATGTTTGACCTAACAAGTCGTCGTACTCTGTATAGTGTTATCAATTGGCATCAGCAAGCTAGGAACTACAATCAGACAGCAATTCTAGTAATGGTTGGAAGCAAGTTTGATGAATTTGTCCAGCTTCCGTTGGATTTACAATGGACTATCGCAAGTGAGGCAAGAGCATATGCGAAGGCTTTAAATGCGACCTTGTTCTTCTCAAGTGCATCTTACAATATTAACGTTAATAAAATTTTCAAGTTTGTGACCGCAAAGCTATTTGACTTGCCATGGACTCTCAAACGTAATCTTACAATTGGTGAGCCTATTATCGATTTCTAG	927	42.07	MSEISRKMRRINLKRTLIWRVTLLRRSVRSLWHQIIVCWIGKSIRYRQQLTSGAGPLIPTCHRRSVPVERTTTVDMATVCHQGPSREMSACGGDGLAVSGDATSSFGGYDRDQDGSDLVALKICVLGDEQIGKTSFLAKYVGKEKNNEAKGISHMDKTLRIGGARISYSIWEVGGDTNLYPDGDSMNMIPRACKDSVAIFFMFDLTSRRTLYSVINWHQQARNYNQTAILVMVGSKFDEFVQLPLDLQWTIASEARAYAKALNATLFFSSASYNINVNKIFKFVTAKLFDLPWTLKRNLTIGEPIIDF	308

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amtr01g04322	308	PANTHER	-	119	307	-	GO:0003924(PANTHER)\|GO:0005525(PANTHER)
	Amtr01g04322	308	SMART	rab-sub-5	121	291	-	-
	Amtr01g04322	308	ProSiteProfiles	small GTPase Rab1 family profile.	110	308	-	-
	Amtr01g04322	308	Pfam	Ras family	122	287	IPR001806	GO:0003924(InterPro)\|GO:0005525(InterPro)
	Amtr01g04322	308	PRINTS	Transforming protein P21 ras signature	226	239	-	-
	Amtr01g04322	308	PRINTS	Transforming protein P21 ras signature	159	181	-	-
	Amtr01g04322	308	PRINTS	Transforming protein P21 ras signature	121	142	-	-
	Amtr01g04322	308	PRINTS	Transforming protein P21 ras signature	266	288	-	-
	Amtr01g04322	308	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	121	300	IPR027417	-
	Amtr01g04322	308	Gene3D	-	110	297	IPR027417	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amtr01g04322	K07976	Rab family, other

Event-related genes

Select	Gene_1	Gene_2	Event_name
	358181	Amtr01g04322	Amtr06g04253

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Amtr	Amtr-Chr1:116594205	Amtr01g06752	Amtr-Chr1:177705745	dispersed
	Amtr	Amtr-Chr1:116594205	Amtr06g04253	Amtr-Chr6:93715395	wgd