Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amtr01g04329	ATGGAGAGTAAAAACAAGCTCAGAATCGCATTTACCGTCACCTGTCTTGCTGTTGCCACAATTTTACTGGCTAATAAATTTCGCAAAAAGCGAAAACACAATATAACCTCTTGTTACTTGAAATCAGAAGCTAAACCACAACACAGTTTTAAACGTGTTTTAGCCAACAATTCGTATGCTCCATTTAAGCACCTCAAACTCCACGAAAATTCTTCGGATTTGCATCCGTATGAATCAGAGATCAAGGCCCTGTTGGATAATTCACAGCTAGAATTCGAGTTTTCTAATGAAAGTATGGATATGAACATGAGTGATAAGTATGTTTGGGTTGATGACGAGTCAAAATTAAAAGAACTTGTTGAGGTTTTGAGCAAAGAAAGAGTGTTTGCTGTGGATACTGAACAGCATAGCTTACGGTCGTTCTTAGGGTTTACAGCTCTTATTCAGATTTCTACCAGAGATGAAGATTATTTGGTGGATACCATTGCTGTTCATGATAGTATGGGACTTCTTGCCCCTGTATTTGCTAATCCCAATATTTGCAAGGTGTTCCATGGTGCTGATAATGATGTTATATGGCTACAAAGGGATTTTCATATTTATGTTGTAAACTTATTTGACACTGCAAAGGCGTGTGATGTGTTATCTAAACCACAGAGATCATTAGCCTACTTACTCGAAACATATTGTGGTGTCACCACTAACAAGCTTTACCAGCGTGAAGATTGGCGACAACGTCCGTTACCAATAGATATGGTTGAATATGCTCGGATGGATGCACACTATTTGCTTTATATTGCAGACTGTCTTGTTTCTGAGCTAAAAAACCAGCAAAACGATAATAGTGCATCAGAAAATTCAGCCGCTCTCGATGACAAATTGCATTTTGTTTCTGAGGCCATCCGGCGTTCGAATGCCTTGTGTCTGCAACTCTTCACCAAAGATCTAGAAGCTTCCCCAGGGCAGTCTGCTGCTGCTTCTATTATTTCCCGTCACTTAAATGATCATGGAAATTCTGCAAACAACAGCCAGTTTCAGGATCTTGTTAGACGTCTATGCTGTTGGAGGGATTTGATGGCCCGTATGCATGATGAGAGCCTTAGATACGTACTATCTGATAACGCCATTATCTCTCTGGCGGAAACAGTTCCACTAACTTCAGCAGATGTTTGCACTATAATATCACAAGCTGATATAGACGTGGACCTTCTAAATACCAATTCTTCCCCTCGGTTTCCATCCTCTGTTGTCTTGAGTCACTTGGATGACTTCCCCTGCCTCCTCCAAGATGAGATAAACAATCTTGATGATATATTTCAACTAATTCTCAAAAAGCACCTTGGTCCAAACGGTTCTTGTCCTTTTTCACTTTACAACTATGGTTTACTTTCTAAAACCAACATCAAATTATCAAAGAAATTAGTTTCAAAGGCAAGTGGATACAAGTTATCGAAAAAAGTTGCTCGCAAGGCTTCTCGAGAGCTTTTTGTTCAGAAGTTTTCTTGCAAATCTCCTGTGTATCATAACTGCAGGATATATGCTAATGATGGAAGATTGTTGTGTTACTGCGATCGAAGGAAGCTAGAATGGTATGTGCAGCGGGACCTAGCAAAACTTGTTGATGAAGACCCACCAGCCATAATGCTTCTCTTTGAACCCAAAGGCCGCCCAGAAGACGAAGGAAATGATTTTTATATTCAAAGTAAAAAAAATATATGTGTAGGGTGTGGTGAAGGAAATCACTATTTACGGTACCGTATAATCCCATCATGCTATAGAATACACTTTCCTGAACATTTAAAAAGCCACCGGTCTCATGATATTGTTTTAGTTTGTGTTGATTGCCATGAAAAAGCACATTCAGCTGCCGAAAGGTACAAAAAGAAGGTAGCTTTGGAATTCGGGATACCATTATTTGTACAAAAAGTGGTTAATTCTAATGAGGAACAAGATGTTTCTGGATCTTCGACATCTGTCATGAAACTTGGTGATTGCGGTGTCTCTCCTTTAGAGTTGAGAACGGCTGCAATGGCTCTTATAAGGCATGGCCCACGGATGCCACCTCAGCGCCGCGAGGAATTGAAACAGGTTGTCATGAAATATTATGGAGGGAGAGATATATCAGAGGAAGATTTAGAAAAGGCTTTACTAGTAGGAATGAGTCCTCATGAAAAAAGACGATTACGGAAAAAAAGAGGCATATCTCTTAATAACACTTCTTCAAACAACATTGTTTCAGACAAGGACATCAAGGGAGATGATGTGGATTCATACTGTAATGAAGTTCAAGAGCCTGAAAATGGTTCAAGCTTGGATATTTTGGATCCATCTGAACCAAACGGGCAGGTTCACCCGAGTTCTGATGGGGCGGTCTTTGCCACATGTAGTTCAAAGTTATCGTTATTAGGGCATGGCCCACATGGGAAACAAGTTGTTGATTATTTGTTGAAGAACCATGGGGAAATTGGAATTCAAGAATTTTGTCAAAGATGGAGACAAGTATTTGTTGAAAGTATCAATCCTCGTTTTTTGCCTGCGGGTTGGGATGTTACTCACAGCGGTAGAAGAGAGTTTGGGGACTTCAGTGTATACAATCCTGCAAATAAGGCTCCTGTTACTACTAAGGATTAA	2631	39.95	MESKNKLRIAFTVTCLAVATILLANKFRKKRKHNITSCYLKSEAKPQHSFKRVLANNSYAPFKHLKLHENSSDLHPYESEIKALLDNSQLEFEFSNESMDMNMSDKYVWVDDESKLKELVEVLSKERVFAVDTEQHSLRSFLGFTALIQISTRDEDYLVDTIAVHDSMGLLAPVFANPNICKVFHGADNDVIWLQRDFHIYVVNLFDTAKACDVLSKPQRSLAYLLETYCGVTTNKLYQREDWRQRPLPIDMVEYARMDAHYLLYIADCLVSELKNQQNDNSASENSAALDDKLHFVSEAIRRSNALCLQLFTKDLEASPGQSAAASIISRHLNDHGNSANNSQFQDLVRRLCCWRDLMARMHDESLRYVLSDNAIISLAETVPLTSADVCTIISQADIDVDLLNTNSSPRFPSSVVLSHLDDFPCLLQDEINNLDDIFQLILKKHLGPNGSCPFSLYNYGLLSKTNIKLSKKLVSKASGYKLSKKVARKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYVQRDLAKLVDEDPPAIMLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLVCVDCHEKAHSAAERYKKKVALEFGIPLFVQKVVNSNEEQDVSGSSTSVMKLGDCGVSPLELRTAAMALIRHGPRMPPQRREELKQVVMKYYGGRDISEEDLEKALLVGMSPHEKRRLRKKRGISLNNTSSNNIVSDKDIKGDDVDSYCNEVQEPENGSSLDILDPSEPNGQVHPSSDGAVFATCSSKLSLLGHGPHGKQVVDYLLKNHGEIGIQEFCQRWRQVFVESINPRFLPAGWDVTHSGRREFGDFSVYNPANKAPVTTKD	876

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amtr01g04329	876	Gene3D	-	43	318	IPR036397	GO:0003676(InterPro)
	Amtr01g04329	876	Pfam	HRDC domain	346	393	IPR002121	GO:0003676(InterPro)
	Amtr01g04329	876	MobiDBLite	consensus disorder prediction	759	785	-	-
	Amtr01g04329	876	SUPERFAMILY	HRDC-like	342	395	IPR010997	GO:0000166(InterPro)\|GO:0044237(InterPro)
	Amtr01g04329	876	Pfam	3'-5' exonuclease	107	274	IPR002562	GO:0003676(InterPro)\|GO:0006139(InterPro)\|GO:0008408(InterPro)
	Amtr01g04329	876	SUPERFAMILY	Ribonuclease H-like	45	290	IPR012337	-
	Amtr01g04329	876	ProSiteProfiles	HRDC domain profile.	342	431	IPR002121	GO:0003676(InterPro)
	Amtr01g04329	876	SMART	35exoneu6	107	275	IPR002562	GO:0003676(InterPro)\|GO:0006139(InterPro)\|GO:0008408(InterPro)
	Amtr01g04329	876	FunFam	Polynucleotidyl transferase ribonuclease H fold protein with HRDC domain	44	318	-	-
	Amtr01g04329	876	PANTHER	POLYMYOSITIS-SCLERODERMA AUTOANTIGEN-RELATED	29	869	IPR045092	GO:0000175(PANTHER)\|GO:0000175(InterPro)\|GO:0000176(PANTHER)\|GO:0000467(PANTHER)\|GO:0000467(InterPro)\|GO:0003727(PANTHER)\|GO:0005730(PANTHER)\|GO:0071035(PANTHER)\|GO:0071036(PANTHER)\|GO:0071037(PANTHER)\|GO:0071038(PANTHER)\|GO:0071039(PANTHER)\|GO:0071040(PANTHER)\|GO:0071044(PANTHER)\|GO:0071051(PANTHER)
	Amtr01g04329	876	CDD	Rrp6p-like-exo	103	281	IPR049559	-
	Amtr01g04329	876	Gene3D	HRDC domain	333	439	IPR044876	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amtr01g04329	K12951	cobalt/nickel-transporting P-type ATPase D [EC:7.2.2.-]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Amtr	Amtr-Chr1:116768337	Amtr05g02734	Amtr-Chr5:50515775	dispersed