AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amtr01g04375 ATGTCGGTCCGATCAATCTCTCAACAAGCATTCAACGAAATGGTTAAAGAAAACATAGACGATTTAGGTATGGAACCAGCAGAAGCCTTAACCGACGCAATCGAAACCCTAACACTACAAGGCGTAGATCTCTCCGGTATTATTACCAATACACTCCCTGGAGAAGCTAATCCGGTGATCCAGGCTCTTGATAGGATCAAACAGTTACAGCCGTTGGATTTGACAGATGAAAGCGTTGTAGATGAGGTTATAGGGCTGTTGGATGGTTTGGTTGTGTTGTGTAGCAGTGAGGGGTCTGGAAATGCTGCTGTTTGTGCTAGGAATGGAGGTGTGGAGTTGATGTGTTCTGTTTGTTTGAAAGCTAGGGATAGTGGTTGTGGTTCTGTTCTTGTATTGGCTTTAGATGCATTGGCTGTGTTTCTTTATGATCTTCAAAGTACAGAAACTTTTAGGCAAAGTGGAGGACCAAAAATGTTGATTGAGATCCTAACCAATGAAACTCAAAGTGTGAATATCTTGAACAGTGGTTTTTCTGTTGTTACTGCTGCTTCAACTGGTAATGAGGTTATTAAGGAATCTTTTGTGGAATTACACATAGATGAAATAATAGTTACAATCATGAAGAAATATGCTAAGGGGAGCATTCCCAGTTTATATGATGCTATCAGAGTGCTTTTGGCTGCTGATGATAACCGTGTAGTGGCTTCACAAGTTTATGGCTATGCTCGACAATTTGCCAAAATTGGAATTGCTGAAGCTCTTGTGGAGTCATTGAAGGATGGAATTAGCTCACCAGGTCTTGTATCAGCAACAATTGCACTAAAAGCCGTTGCAGTGAATGATGAAATATGCAGATCGGTTGCTGAGAAGGGCGGTATAGATTCATTGCTCATATGTATTGATGAATGTGGTGTGCAAGGGAATAAAATTGCGGCTAAAGCTTGTTGCTCCTTATTATCAAAGTTGGCAGGAAGTGACTTTAACAAGAGTGCTATTGTTGAAAAGGGAGGGTTGAATAGACTCATCACACTGTCTAGCAGACTTGCTGATGATGCTTCTGTGCTCCAAGAGGTGATGACTATCATATGCACCCTGTGCCTGCGATCACCTGCAAATGCATCTTTGGCAATGGAAGCAGGAGCAGGAGACCTTGCTATCCAGTCGATGCAAAAGTTCCCTCAGTCATATCAACTGCAGAAAAATTCTTGCCTTATGATCCGTAATCTTGTTGCCAGGAATTTAGAGAACAGGCCTGTTTTATTGAGTAATGGTATTGAGAAGCTAATAAGGAATGCTAAGGAAAGCCACAAAAGCTGCAGAGATGCAGCCATTGCTGCTCTTAGAGACTTGGGGCTTGATAACTACAATTCTTAG 1374 41.78 MSVRSISQQAFNEMVKENIDDLGMEPAEALTDAIETLTLQGVDLSGIITNTLPGEANPVIQALDRIKQLQPLDLTDESVVDEVIGLLDGLVVLCSSEGSGNAAVCARNGGVELMCSVCLKARDSGCGSVLVLALDALAVFLYDLQSTETFRQSGGPKMLIEILTNETQSVNILNSGFSVVTAASTGNEVIKESFVELHIDEIIVTIMKKYAKGSIPSLYDAIRVLLAADDNRVVASQVYGYARQFAKIGIAEALVESLKDGISSPGLVSATIALKAVAVNDEICRSVAEKGGIDSLLICIDECGVQGNKIAAKACCSLLSKLAGSDFNKSAIVEKGGLNRLITLSSRLADDASVLQEVMTIICTLCLRSPANASLAMEAGAGDLAIQSMQKFPQSYQLQKNSCLMIRNLVARNLENRPVLLSNGIEKLIRNAKESHKSCRDAAIAALRDLGLDNYNS 457
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amtr01g04375 457 SUPERFAMILY ARM repeat 79 260 IPR016024 -
Amtr01g04375 457 Gene3D - 69 236 IPR011989 -
Amtr01g04375 457 Gene3D - 237 455 IPR011989 -
Amtr01g04375 457 SUPERFAMILY ARM repeat 249 451 IPR016024 -
Amtr01g04375 457 PANTHER UNCHARACTERIZED 3 453 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amtr01g04375 K24166 armadillo repeat-containing protein 6